RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 PCDH9Q9HC56 1237 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 PKD2L2Q9NZM6 624 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 MTO1Q9Y2Z2 717 aaKnown RBP20.36■□□□□ 0.85
PCDH8-202ENST00000377942 KRT16P08779 473 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 TBX4P57082 545 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 AMPD2Q01433 879 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 SLC6A3Q01959 620 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 CARNMT1Q8N4J0 409 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 IL31RAQ8NI17 732 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 YY1AP1Q9H869 796 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 VPS28Q9UK41 221 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 DDX3XO00571 662 aaKnown RBP eCLIP20.35■□□□□ 0.85
PCDH8-202ENST00000377942 CUL3Q13618 768 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 FAM110CQ1W6H9 321 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 FAM167BQ9BTA0 163 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 IPPQ9Y573 584 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 ARHGAP10A1A4S6 786 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 ACAT1P24752 427 aaKnown RBP20.35■□□□□ 0.85
PCDH8-202ENST00000377942 CBWD6Q4V339 395 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 CBWD3Q5JTY5 395 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 CBWD5Q5RIA9 395 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 AGAP9Q5VTM2 703 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 C3orf20Q8ND61 904 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 E2F7Q96AV8 911 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 CCT8L2Q96SF2 557 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 GAD1Q99259 594 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 TBC1D13Q9NVG8 400 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 RIC8BQ9NVN3 520 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 TRMT6Q9UJA5 497 aaKnown RBP20.35■□□□□ 0.85
PCDH8-202ENST00000377942 JCHAINP01591 159 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 RFC1P35251 1148 aaPredicted RBP20.35■□□□□ 0.85
PCDH8-202ENST00000377942 IKBKEQ14164 716 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 REM2Q8IYK8 340 aaPredicted RBP20.35■□□□□ 0.85
PCDH8-202ENST00000377942 DPF3Q92784 378 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 SENP8Q96LD8 212 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 SCUBE2Q9NQ36 999 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 PDGFCQ9NRA1 345 aa20.35■□□□□ 0.85
PCDH8-202ENST00000377942 VCPP55072 806 aaKnown RBP20.34■□□□□ 0.85
PCDH8-202ENST00000377942 MROH9Q5TGP6 573 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 RETSATQ6NUM9 610 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 LVRNQ6Q4G3 990 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 SLC2A14Q8TDB8 520 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 SPATA16Q9BXB7 569 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 FTHL17Q9BXU8 183 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 GLRA3O75311 464 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 CRTAMO95727 393 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 CNTFP26441 200 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 RENBPP51606 427 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 FBXO36Q8NEA4 188 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.34■□□□□ 0.85
PCDH8-202ENST00000377942 DNAJC8O75937 253 aaPredicted RBP20.34■□□□□ 0.85
PCDH8-202ENST00000377942 NR2C2P49116 596 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 DOLKQ9UPQ8 538 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 SIK3Q9Y2K2 1263 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 SNCAIPQ9Y6H5 919 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 PTENP60484 403 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 BMT2Q1RMZ1 405 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 DNAL1Q4LDG9 190 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 SETD3Q86TU7 594 aaPredicted RBP20.34■□□□□ 0.85
PCDH8-202ENST00000377942 CCDC126Q96EE4 140 aa20.34■□□□□ 0.85
PCDH8-202ENST00000377942 YDJCA8MPS7 323 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 RNASEH1O60930 286 aaKnown RBP20.33■□□□□ 0.85
PCDH8-202ENST00000377942 CDH8P55286 799 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 RHOAP61586 193 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 ARL8AQ96BM9 186 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 MTMR8Q96EF0 704 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 ADGRE3Q9BY15 652 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 PCDHA3Q9Y5H8 950 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 TRIM66O15016 1216 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 PPFIA2O75334 1257 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 RPSAP08865 295 aaKnown RBP20.33■□□□□ 0.85
PCDH8-202ENST00000377942 PPP3CAQ08209 521 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 CAPSQ13938 189 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 HIC1Q14526 733 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 NFIL3Q16649 462 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 LBX2Q6XYB7 198 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 ACO2Q99798 780 aaKnown RBP20.33■□□□□ 0.85
PCDH8-202ENST00000377942 C2CD2Q9Y426 696 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 PARP4Q9UKK3 1724 aaKnown RBP20.33■□□□□ 0.85
PCDH8-202ENST00000377942 COL1A2P08123 1366 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 MAGEB16A2A368 324 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 FKTNO75072 461 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 ATP9AO75110 1047 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 SPDYAQ5MJ70 313 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 MOB2Q70IA6 237 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 LZICQ8WZA0 190 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 DCDC2Q9UHG0 476 aa20.33■□□□□ 0.85
PCDH8-202ENST00000377942 RNF103-CHMP3A0A140T963 221 aa20.33■□□□□ 0.84
PCDH8-202ENST00000377942 VPS26AO75436 327 aa20.33■□□□□ 0.84
PCDH8-202ENST00000377942 IL10P22301 178 aa20.33■□□□□ 0.84
PCDH8-202ENST00000377942 CNGA2Q16280 664 aa20.33■□□□□ 0.84
PCDH8-202ENST00000377942 LCA5Q86VQ0 697 aa20.33■□□□□ 0.84
PCDH8-202ENST00000377942 PCYOX1LQ8NBM8 494 aa20.33■□□□□ 0.84
PCDH8-202ENST00000377942 SHOC2Q9UQ13 582 aa20.33■□□□□ 0.84
PCDH8-202ENST00000377942 USP20Q9Y2K6 914 aa20.33■□□□□ 0.84
PCDH8-202ENST00000377942 LRRC55Q6ZSA7 311 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 ZNF473Q8WTR7 871 aaKnown RBP20.32■□□□□ 0.84
PCDH8-202ENST00000377942 TSPYL2Q9H2G4 693 aaPredicted RBP20.32■□□□□ 0.84
PCDH8-202ENST00000377942 CDYLQ9Y232 598 aa20.32■□□□□ 0.84
PCDH8-202ENST00000377942 SPATA31C1P0DKV0 1188 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms