RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 BTKQ06187 659 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 KCNA1Q09470 495 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 WASHC5Q12768 1159 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 TTLL4Q14679 1199 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 SPANXN3Q5MJ09 141 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 N4BP2L1Q5TBK1 243 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-202ENST00000377865 DENND5BQ6ZUT9 1274 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 FITM2Q8N6M3 262 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 STKLD1Q8NE28 680 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 ZNF669Q96BR6 464 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-202ENST00000377865 IFT43Q96FT9 208 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 TARS2Q9BW92 718 aaKnown RBP9.07□□□□□ -0.96
PCDH9-202ENST00000377865 RABGEF1Q9UJ41 708 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 TIAM2Q8IVF5 1701 aa9.07□□□□□ -0.96
PCDH9-202ENST00000377865 MYH15Q9Y2K3 1946 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 A8MUI8 341 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 MEI4A8MW99 385 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 MEIS2O14770 477 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 RGS7P49802 495 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 NEK2P51955 445 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 RPL10AP62906 217 aaKnown RBP9.06□□□□□ -0.96
PCDH9-202ENST00000377865 SLC12A1Q13621 1099 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 C2CD6Q53TS8 623 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 SPDYAQ5MJ70 313 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 TMCO4Q5TGY1 634 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 FRA10AC1Q70Z53 315 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 CPNE1Q99829 537 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 BEGAINQ9BUH8 593 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 CISHQ9NSE2 258 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 CPSF3Q9UKF6 684 aaKnown RBP9.06□□□□□ -0.96
PCDH9-202ENST00000377865 PLIN4Q96Q06 1357 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 C5P01031 1676 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 ZBBXA8MT70 800 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 POLRMTO00411 1230 aaKnown RBP9.06□□□□□ -0.96
PCDH9-202ENST00000377865 MAGEC1O60732 1142 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 SUPT20HL2P0C7V6 817 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 SNHG28P0DPA3 235 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 NCKAP1LP55160 1127 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 FKBP1AP62942 108 aaKnown RBP9.06□□□□□ -0.96
PCDH9-202ENST00000377865 ILF2Q12905 390 aaKnown RBP9.06□□□□□ -0.96
PCDH9-202ENST00000377865 ITGA9Q13797 1035 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 PRMT9Q6P2P2 845 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 DSTYKQ6XUX3 929 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 RIPOR1Q6ZS17 1223 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 POLNQ7Z5Q5 900 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 ZNF606Q8WXB4 792 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 SEPT1Q8WYJ6 367 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 LNPEPQ9UIQ6 1025 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 KCPQ6ZWJ8 1503 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 CLASP2O75122 1294 aaKnown RBP9.06□□□□□ -0.96
PCDH9-202ENST00000377865 DGKIO75912 1065 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 PTGER2P43116 358 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 NR2C2P49116 596 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 TMED10P49755 219 aaKnown RBP9.06□□□□□ -0.96
PCDH9-202ENST00000377865 CDC42EP1Q00587 391 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 RBBP7Q16576 425 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 C4orf50Q6ZRC1 276 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 ADCK1Q86TW2 530 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 FAM81AQ8TBF8 368 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 CNDP1Q96KN2 507 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 RMDN2Q96LZ7 410 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 ARMCX1Q9P291 453 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 COG5Q9UP83 839 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 HACD1B0YJ81 288 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 ACAT1P24752 427 aaKnown RBP9.06□□□□□ -0.96
PCDH9-202ENST00000377865 CCNHP51946 323 aaPredicted RBP9.06□□□□□ -0.96
PCDH9-202ENST00000377865 KCNT1Q5JUK3 1230 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 LPCAT2Q7L5N7 544 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 EEPD1Q7L9B9 569 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 SLCO2A1Q92959 643 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 SPATA33Q96N06 139 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 TEX13BQ9BXU2 312 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 ASCC2Q9H1I8 757 aaPredicted RBP9.06□□□□□ -0.96
PCDH9-202ENST00000377865 TCF7L2Q9NQB0 619 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 C6orf203Q9P0P8 240 aaPredicted RBP9.06□□□□□ -0.96
PCDH9-202ENST00000377865 BTBD7Q9P203 1132 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 ATXN10Q9UBB4 475 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 FETUBQ9UGM5 382 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 PCDHA11Q9Y5I1 949 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 TMEM114B3SHH9 223 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 HNRNPRO43390 633 aaKnown RBP9.06□□□□□ -0.96
PCDH9-202ENST00000377865 FESP07332 822 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 HSD17B4P51659 736 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 ENPEPQ07075 957 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 ANO4Q32M45 955 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 MPZL3Q6UWV2 235 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 CCDC33Q8N5R6 958 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 UBA3Q8TBC4 463 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 ACMSDQ8TDX5 336 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 ZNF483Q8TF39 744 aaPredicted RBP9.06□□□□□ -0.96
PCDH9-202ENST00000377865 MTMR12Q9C0I1 747 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 VAV3Q9UKW4 847 aa9.06□□□□□ -0.96
PCDH9-202ENST00000377865 SLIT2O94813 1529 aa9.05□□□□□ -0.96
PCDH9-202ENST00000377865 MAGEB16A2A368 324 aa9.05□□□□□ -0.96
PCDH9-202ENST00000377865 C19orf81C9J6K1 198 aa9.05□□□□□ -0.96
PCDH9-202ENST00000377865 H0Y626 953 aa9.05□□□□□ -0.96
PCDH9-202ENST00000377865 H0YGN5 161 aa9.05□□□□□ -0.96
PCDH9-202ENST00000377865 GSC2O15499 205 aa9.05□□□□□ -0.96
PCDH9-202ENST00000377865 TRIM16O95361 564 aa9.05□□□□□ -0.96
PCDH9-202ENST00000377865 GLRA2P23416 452 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms