RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 IRGQQ8WZA9 623 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 CEP295NLQ96MC4 621 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 GOLPH3Q9H4A6 298 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 EHD2Q9NZN4 543 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 DPP7Q9UHL4 492 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 TMEM59LQ9UK28 342 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 SCML2Q9UQR0 700 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 CCL16O15467 120 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 BUB1BO60566 1050 aaPredicted RBP13.57□□□□□ -0.24
CBWD3-203ENST00000377344 MTA2O94776 668 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 PSMA2P25787 234 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 FLT3P36888 993 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 SCNN1AP37088 669 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 HADHBP55084 474 aaKnown RBP13.57□□□□□ -0.24
CBWD3-203ENST00000377344 YWHAGP61981 247 aaKnown RBP eCLIP13.57□□□□□ -0.24
CBWD3-203ENST00000377344 TAF10Q12962 218 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 ELMSAN1Q6PJG2 1045 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 DNAJB7Q7Z6W7 309 aaPredicted RBP13.57□□□□□ -0.24
CBWD3-203ENST00000377344 ITIH5Q86UX2 942 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 DEFB106AQ8N104 65 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 SCML4Q8N228 414 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 TRIM58Q8NG06 486 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 SLC22A17Q8WUG5 538 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 RXFP2Q8WXD0 754 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 EDEM1Q92611 657 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 KHSRPQ92945 711 aaKnown RBP eCLIP13.57□□□□□ -0.24
CBWD3-203ENST00000377344 CALR3Q96L12 384 aaKnown RBP13.57□□□□□ -0.24
CBWD3-203ENST00000377344 ZNF512Q96ME7 567 aaPredicted RBP13.57□□□□□ -0.24
CBWD3-203ENST00000377344 CFAP57Q96MR6 1250 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 SLITRK1Q96PX8 696 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 TTYH1Q9H313 450 aaPredicted RBP13.57□□□□□ -0.24
CBWD3-203ENST00000377344 POPDC2Q9HBU9 364 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 COMMD8Q9NX08 183 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 GMIPQ9P107 970 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 IP6K2Q9UHH9 426 aa13.57□□□□□ -0.24
CBWD3-203ENST00000377344 MYO16Q9Y6X6 1858 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 ATG2AQ2TAZ0 1938 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 A0A1W2PQH9 124 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 GRID2IPA4D2P6 1211 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 SOX1O00570 391 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-203ENST00000377344 RFPL2O75678 378 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 GLI1P08151 1106 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 NCAM1P13591 858 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 DESP17661 470 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 GPD1P21695 349 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 SDC4P31431 198 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.24
CBWD3-203ENST00000377344 RBM10P98175 930 aaKnown RBP13.56□□□□□ -0.24
CBWD3-203ENST00000377344 OGDHQ02218 1023 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 DUSP6Q16828 381 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 DCAF6Q58WW2 860 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 ZNF697Q5TEC3 545 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 BSPRYQ5W0U4 402 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 BTBD8Q5XKL5 378 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 BHLHA9Q7RTU4 235 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 MON1AQ86VX9 555 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 SLC35F6Q8N357 371 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 PSMG2Q969U7 264 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 FAM161BQ96MY7 647 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 NSUN3Q9H649 340 aaKnown RBP13.56□□□□□ -0.24
CBWD3-203ENST00000377344 ASNSD1Q9NWL6 643 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.56□□□□□ -0.24
CBWD3-203ENST00000377344 IL37Q9NZH6 218 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 USTQ9Y2C2 406 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 HYOU1Q9Y4L1 999 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 MYO7AQ13402 2215 aa13.56□□□□□ -0.24
CBWD3-203ENST00000377344 TMEM265A0A087WTH1 108 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 C2CD4BA6NLJ0 364 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 DAB1O75553 588 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 ZMYND10O75800 440 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 FTCDO95954 541 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 C1RP00736 705 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 HMGA1P17096 107 aaKnown RBP13.55□□□□□ -0.24
CBWD3-203ENST00000377344 MATKP42679 507 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 SSR1P43307 286 aaKnown RBP13.55□□□□□ -0.24
CBWD3-203ENST00000377344 ATP11AP98196 1134 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 GRIN2CQ14957 1233 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 CDO1Q16878 200 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 SYCE1Q8N0S2 351 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 ARHGAP18Q8N392 663 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 TRIM62Q9BVG3 475 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 TTLL2Q9BWV7 592 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 NMUR1Q9HB89 426 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 TLR8Q9NR97 1041 aaKnown RBP13.55□□□□□ -0.24
CBWD3-203ENST00000377344 NAALADL1Q9UQQ1 740 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 ASB3Q9Y575 518 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 SYNJ2BP-COX16A0A087WUM0 186 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 FAM92AA1XBS5 289 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 SPOPO43791 374 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 PROSCO94903 275 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 TNNT1P13805 278 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 IGFBP4P22692 258 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 PGFP49763 221 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 ZNF143P52747 638 aaPredicted RBP13.55□□□□□ -0.24
CBWD3-203ENST00000377344 ZNF252P-AS1Q0IIN9 211 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 C15orf59Q2T9L4 293 aaPredicted RBP13.55□□□□□ -0.24
CBWD3-203ENST00000377344 TCEAL5Q5H9L2 206 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 DAB2IPQ5VWQ8 1189 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 SYPL2Q5VXT5 272 aa13.55□□□□□ -0.24
CBWD3-203ENST00000377344 TRNP1Q6NT89 227 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms