RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 UNC45BQ8IWX7 931 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 MCOLN2Q8IZK6 566 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 LRRC52Q8N7C0 313 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 MORC4Q8TE76 937 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 MBOAT7Q96N66 472 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 TKTL2Q9H0I9 626 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 VPS11Q9H270 941 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 NHSQ6T4R5 1651 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 SPTBN2O15020 2390 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 ARHGAP42A6NI28 874 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 A8MX80 341 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 NRP1O14786 923 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 PAEPP09466 180 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 RHOAP61586 193 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 PDCLQ13371 301 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 CNGA2Q16280 664 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 THEMIS2Q5TEJ8 643 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 ATL2Q8NHH9 583 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 BLOC1S5Q8TDH9 187 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 SYN2Q92777 582 aaPredicted RBP8.8□□□□□ -1
CRNKL1-202ENST00000377340 N4BP2L2Q92802 583 aaPredicted RBP8.8□□□□□ -1
CRNKL1-202ENST00000377340 CHMP6Q96FZ7 201 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 TSEN34Q9BSV6 310 aaKnown RBP8.8□□□□□ -1
CRNKL1-202ENST00000377340 ATP13A1Q9HD20 1204 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 SFMBT1Q9UHJ3 866 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 PGAP2Q9UHJ9 254 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 SLC30A1Q9Y6M5 507 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 KNTC1P50748 2209 aa8.8□□□□□ -1
CRNKL1-202ENST00000377340 A0A0U1RQF3 1178 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 MYBPHLA2RUH7 354 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 KCNK1O00180 336 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 KPNA3O00505 521 aaPredicted RBP8.79□□□□□ -1
CRNKL1-202ENST00000377340 DDX3XO00571 662 aaKnown RBP eCLIP8.79□□□□□ -1
CRNKL1-202ENST00000377340 AP5Z1O43299 807 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 LZTS3O60299 673 aaPredicted RBP8.79□□□□□ -1
CRNKL1-202ENST00000377340 PCDH8O95206 1070 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 EOMESO95936 686 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 RARGP13631 454 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 TKTP29401 623 aaKnown RBP8.79□□□□□ -1
CRNKL1-202ENST00000377340 CCDC6Q16204 474 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 MORN1Q5T089 497 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 CROCCP2Q86T23 111 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 NUP93Q8N1F7 819 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 SPATA4Q8NEY3 305 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 EPS8L1Q8TE68 723 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 DIS3LQ8TF46 1054 aaKnown RBP8.79□□□□□ -1
CRNKL1-202ENST00000377340 SH3KBP1Q96B97 665 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 TRIM51Q9BSJ1 452 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 FUCA2Q9BTY2 467 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 C11orf84Q9BUA3 381 aaPredicted RBP8.79□□□□□ -1
CRNKL1-202ENST00000377340 HACD3Q9P035 362 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 XIRP1Q702N8 1843 aaKnown RBP8.79□□□□□ -1
CRNKL1-202ENST00000377340 CASZ1Q86V15 1759 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 FAM237AA0A1B0GTK4 181 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 ABHD14A-ACY1A0A1B0GW23 586 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 TRIM66O15016 1216 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 LSM8O95777 96 aaKnown RBP8.79□□□□□ -1
CRNKL1-202ENST00000377340 ATP4AP20648 1035 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 AMPD1P23109 780 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 STARD3Q14849 445 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 TCEA2Q15560 299 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 RAP1GAP2Q684P5 730 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 TTC19Q6DKK2 380 aaPredicted RBP8.79□□□□□ -1
CRNKL1-202ENST00000377340 FAM35AQ86V20 835 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 HS6ST3Q8IZP7 471 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 AFAP1L2Q8N4X5 818 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 TPCN2Q8NHX9 752 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 DCUN1D1Q96GG9 259 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 PARD6BQ9BYG5 372 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 TAS2R14Q9NYV8 317 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 SNX12Q9UMY4 172 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 CAPN6Q9Y6Q1 641 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 NUP188Q5SRE5 1749 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 TTI1O43156 1089 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 ADSSP30520 456 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 CHRNA3P32297 505 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 RFC1P35251 1148 aaPredicted RBP8.79□□□□□ -1
CRNKL1-202ENST00000377340 ZNF131P52739 623 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 SLC6A3Q01959 620 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 BRD3Q15059 726 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 TIGD5Q53EQ6 642 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 RARS2Q5T160 578 aaKnown RBP8.79□□□□□ -1
CRNKL1-202ENST00000377340 GPR158Q5T848 1215 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 CNKSR3Q6P9H4 555 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 TTC23LQ6PF05 361 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 SLC39A5Q6ZMH5 540 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 HERC6Q8IVU3 1022 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 ANKS4BQ8N8V4 417 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 NETO2Q8NC67 525 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 FLCNQ8NFG4 579 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 SERPINB11Q96P15 392 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 KCNF1Q9H3M0 494 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 BRD9Q9H8M2 597 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 POPDC2Q9HBU9 364 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 NT5MQ9NPB1 228 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 G3BP2Q9UN86 482 aaKnown RBP8.79□□□□□ -1
CRNKL1-202ENST00000377340 TRAV19A0A0A6YYK7 116 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 RNASEH1O60930 286 aaKnown RBP8.79□□□□□ -1
CRNKL1-202ENST00000377340 LMO2P25791 158 aa8.79□□□□□ -1
CRNKL1-202ENST00000377340 MAPK7Q13164 816 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms