RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 C4orf50Q6ZRC1 276 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 UBA3Q8TBC4 463 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 ACTL9Q8TC94 416 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 MRRFQ96E11 262 aaKnown RBP17.87■□□□□ 0.45
TRIM27-201ENST00000377194 TRAPPC9Q96Q05 1148 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 SYNCQ9H7C4 482 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 CENPFP49454 3210 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 SGK1O00141 431 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 PIK3R2O00459 728 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 CST8O60676 142 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 GPD2P43304 727 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 GAD2Q05329 585 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 POU5F1BQ06416 359 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 STAT4Q14765 748 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 RAB6CQ53S08 254 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 HPDLQ96IR7 371 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 RAB6CQ9H0N0 254 aa17.87■□□□□ 0.45
TRIM27-201ENST00000377194 ITGAVP06756 1048 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 KDELR1P24390 212 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 GCAP28676 217 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 OTUD4Q01804 1114 aaKnown RBP17.86■□□□□ 0.45
TRIM27-201ENST00000377194 ACSBG2Q5FVE4 666 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 RNASEH2BQ5TBB1 312 aaKnown RBP17.86■□□□□ 0.45
TRIM27-201ENST00000377194 SH3PXD2AQ5TCZ1 1133 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 RASIP1Q5U651 963 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 MTDHQ86UE4 582 aaKnown RBP17.86■□□□□ 0.45
TRIM27-201ENST00000377194 KBTBD2Q8IY47 623 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 SHCBP1Q8NEM2 672 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 DENND1AQ8TEH3 1009 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 FNIP1Q8TF40 1166 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 FBXO41Q8TF61 875 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 C10orf82Q8WW14 230 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 NDNQ99608 321 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 CADM1Q9BY67 442 aaKnown RBP17.86■□□□□ 0.45
TRIM27-201ENST00000377194 ZFP69BQ9UJL9 534 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 EDF1O60869 148 aaKnown RBP17.86■□□□□ 0.45
TRIM27-201ENST00000377194 BANF1O75531 89 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 YBX3P16989 372 aaKnown RBP eCLIP17.86■□□□□ 0.457e-12■■□□□ 12.5
TRIM27-201ENST00000377194 EPHX2P34913 555 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 CCDC142Q17RM4 750 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 FAM182AQ5T1J6 154 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 LRRC74BQ6ZQY2 392 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 TRABD2AQ86V40 505 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 IFNLR1Q8IU57 520 aaPredicted RBP17.86■□□□□ 0.45
TRIM27-201ENST00000377194 C4orf33Q8N1A6 199 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 KLHL23Q8NBE8 558 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 HEXIM2Q96MH2 286 aaKnown RBP17.86■□□□□ 0.45
TRIM27-201ENST00000377194 ASB7Q9H672 318 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 UBN1Q9NPG3 1134 aa17.86■□□□□ 0.45
TRIM27-201ENST00000377194 GOLGA8MH3BSY2 632 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 M0QYV0 167 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 TBX10O75333 385 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 CYP3A5P20815 502 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 RASSF2P50749 326 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 NEK3P51956 506 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 SNAPC2Q13487 334 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 SPARCL1Q14515 664 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 CAPN12Q6ZSI9 719 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 GPRC5AQ8NFJ5 357 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 PIWIL1Q96J94 861 aaKnown RBP17.85■□□□□ 0.45
TRIM27-201ENST00000377194 NPHS2Q9NP85 383 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 DCTN4Q9UJW0 460 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 WASF2Q9Y6W5 498 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 POC1B-GALNT4F8VUJ3 575 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 PTPN4P29074 926 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 MIPP30301 263 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 MARCH8Q5T0T0 291 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 LDLRAD1Q5T700 205 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 TRNP1Q6NT89 227 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 C12orf29Q8N999 325 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 PPTC7Q8NI37 304 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 NLRP7Q8WX94 980 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 KATNBL1Q9H079 304 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 VRTNQ9H8Y1 702 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 CHCHD3Q9NX63 227 aaKnown RBP17.85■□□□□ 0.45
TRIM27-201ENST00000377194 EXOC1LA0A1B0GW35 172 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 H3BRB1 525 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 TSPAN1O60635 241 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 SNAI1O95863 264 aaPredicted RBP17.85■□□□□ 0.45
TRIM27-201ENST00000377194 KRT7P08729 469 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 SPATA31D3P0C874 917 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 RPA3P35244 121 aaPredicted RBP17.85■□□□□ 0.45
TRIM27-201ENST00000377194 NDST1P52848 882 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 NRLP54845 237 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 TNFAIP2Q03169 654 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 DYNC1I2Q13409 638 aaKnown RBP17.85■□□□□ 0.45
TRIM27-201ENST00000377194 TMEM132DQ14C87 1099 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 PKN2Q16513 984 aaKnown RBP17.85■□□□□ 0.45
TRIM27-201ENST00000377194 TAZQ16635 292 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 HHATQ5VTY9 493 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 SPATA31D4Q6ZUB0 917 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 TAB3Q8N5C8 712 aaPredicted RBP17.85■□□□□ 0.45
TRIM27-201ENST00000377194 MCRS1Q96EZ8 462 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 TRABDQ9H4I3 376 aa17.85■□□□□ 0.45
TRIM27-201ENST00000377194 TUT1Q9H6E5 874 aaKnown RBP17.85■□□□□ 0.45
TRIM27-201ENST00000377194 GSTA2P09210 222 aa17.84■□□□□ 0.45
TRIM27-201ENST00000377194 MORF4L2Q15014 288 aa17.84■□□□□ 0.45
TRIM27-201ENST00000377194 SLC1A5Q15758 541 aa17.84■□□□□ 0.45
TRIM27-201ENST00000377194 CNPY1Q3B7I2 92 aa17.84■□□□□ 0.45
TRIM27-201ENST00000377194 USP50Q70EL3 339 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms