RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 COX16Q9P0S2 106 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 DNAJB4Q9UDY4 337 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 DSEQ9UL01 958 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 ENPP3O14638 875 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 INPPL1O15357 1258 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 CYP11A1P05108 521 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 ZSCAN5DPP0CG00 497 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 ETS1P14921 441 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 PTPN9P43378 593 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 SULT1E1P49888 294 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 YWHAZP63104 245 aaKnown RBP13.49□□□□□ -0.25
TRIM40-206ENST00000376724 LMNB2Q03252 620 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 DPYSL3Q14195 570 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 CA9Q16790 459 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 BOLA3Q53S33 107 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 PPP6R3Q5H9R7 873 aaPredicted RBP13.49□□□□□ -0.25
TRIM40-206ENST00000376724 INTS6LQ5JSJ4 861 aaKnown RBP13.49□□□□□ -0.25
TRIM40-206ENST00000376724 BBS12Q6ZW61 710 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 CTU1Q7Z7A3 348 aaKnown RBP13.49□□□□□ -0.25
TRIM40-206ENST00000376724 CCDC25Q86WR0 208 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 ABI1Q8IZP0 508 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 THEM5Q8N1Q8 247 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 GLIS1Q8NBF1 620 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 ZMIZ2Q8NF64 920 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 OR2W6PQ8NHA6 318 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 SMARCD1Q96GM5 515 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 SUSD3Q96L08 255 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 DDX23Q9BUQ8 820 aaKnown RBP13.49□□□□□ -0.25
TRIM40-206ENST00000376724 ULBP1Q9BZM6 244 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 TMLHEQ9NVH6 421 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 CALCOCO1Q9P1Z2 691 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 EFR3BQ9Y2G0 817 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 PCDHB7Q9Y5E2 793 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 SGK1O00141 431 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 NRP1O14786 923 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 OPA1O60313 960 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 IFNB1P01574 187 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 USP17L7P0C7H9 530 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 SCNN1AP37088 669 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 MATKP42679 507 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 GATMP50440 423 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 ITGA8P53708 1063 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 VCPP55072 806 aaKnown RBP13.49□□□□□ -0.25
TRIM40-206ENST00000376724 CCL23P55773 120 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 BCAR1P56945 870 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 YWHAHQ04917 246 aaPredicted RBP13.49□□□□□ -0.25
TRIM40-206ENST00000376724 TAZQ16635 292 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 PLEKHG4Q58EX7 1191 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 NPNTQ6UXI9 565 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 HFE2Q6ZVN8 426 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 LRRTM3Q86VH5 581 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 MAP7D3Q8IWC1 876 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 COLGALT2Q8IYK4 626 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 CCDC89Q8N998 374 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.49□□□□□ -0.25
TRIM40-206ENST00000376724 MAGEB5Q9BZ81 275 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 TMEM161AQ9NX61 479 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 WHRNQ9P202 907 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 OGDHLQ9ULD0 1010 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 NEU2Q9Y3R4 380 aa13.49□□□□□ -0.25
TRIM40-206ENST00000376724 PPFIA2O75334 1257 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 PECAM1P16284 738 aaPredicted RBP13.48□□□□□ -0.25
TRIM40-206ENST00000376724 ITIH2P19823 946 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 IVDP26440 423 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 ARSEP51690 589 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 PMS2P54278 862 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 PITX1P78337 314 aaPredicted RBP13.48□□□□□ -0.25
TRIM40-206ENST00000376724 DSC1Q08554 894 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 MTMR3Q13615 1198 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 TCTN1Q2MV58 587 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 ERMARDQ5T6L9 678 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 SYPL2Q5VXT5 272 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 FAM171BQ6P995 826 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 DRICH1Q6PGQ1 229 aaPredicted RBP13.48□□□□□ -0.25
TRIM40-206ENST00000376724 B4GALNT4Q76KP1 1039 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 ARCQ7LC44 396 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 ALLCQ8N6M5 410 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 CCDC185Q8N715 623 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 TTC13Q8NBP0 860 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 SEPT8Q92599 483 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 CENPIQ92674 756 aaPredicted RBP13.48□□□□□ -0.25
TRIM40-206ENST00000376724 C11orf84Q9BUA3 381 aaPredicted RBP13.48□□□□□ -0.25
TRIM40-206ENST00000376724 PPP1R12CQ9BZL4 782 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 DHX35Q9H5Z1 703 aaKnown RBP13.48□□□□□ -0.25
TRIM40-206ENST00000376724 KANSL3Q9P2N6 904 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 ANAPC5Q9UJX4 755 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 LRFN2Q9ULH4 789 aa13.48□□□□□ -0.25
TRIM40-206ENST00000376724 YJEFN3A6XGL0 299 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 E7ENQ6 273 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 CAPN9O14815 690 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 TADA2AO75478 443 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 ENDOD1O94919 500 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 OR4Q2P0C623 313 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 KLRC2P26717 231 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 TSPY1Q01534 308 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 PDK2Q15119 407 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 OASLQ15646 514 aaKnown RBP13.47□□□□□ -0.25
TRIM40-206ENST00000376724 P3H1Q32P28 736 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 SLC25A52Q3SY17 297 aa13.47□□□□□ -0.25
TRIM40-206ENST00000376724 CEP85LQ5SZL2 805 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms