RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 DEC1Q9P2X7 70 aa15.61■□□□□ 0.09
HDAC6-204ENST00000376643 PCDHA5Q9Y5H7 936 aa15.61■□□□□ 0.09
HDAC6-204ENST00000376643 TBC1D3BA6NDS4 549 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 TNFRSF10BO14763 440 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 TLR5O60602 858 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 KCNA4P22459 653 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 PSEN1P49768 467 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 VAMP7P51809 220 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 NDST1P52848 882 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 CDH8P55286 799 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 SV2AQ7L0J3 742 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 LPCAT2Q7L5N7 544 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 GRAMD1CQ8IYS0 662 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 FUKQ8N0W3 1084 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 SLC2A14Q8TDB8 520 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 CNTNAP3BQ96NU0 1288 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 XPO6Q96QU8 1125 aaKnown RBP15.6■□□□□ 0.09
HDAC6-204ENST00000376643 NT5C1AQ9BXI3 368 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 CNTNAP3Q9BZ76 1288 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 SCAND2PQ9GZW5 306 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-204ENST00000376643 FAM124BQ9H5Z6 455 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-204ENST00000376643 SPHK2Q9NRA0 654 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 GMIPQ9P107 970 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 WDR35Q9P2L0 1181 aa15.6■□□□□ 0.09
HDAC6-204ENST00000376643 CHORDC1Q9UHD1 332 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-204ENST00000376643 MAP3K13O43283 966 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 STX10O60499 249 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 RHOBTB3O94955 611 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 VNN1O95497 513 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 KLF8O95600 359 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-204ENST00000376643 NR2F2P24468 414 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 GTF2H1P32780 548 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 ATP5C1P36542 298 aaKnown RBP15.59■□□□□ 0.09
HDAC6-204ENST00000376643 INCA1Q0VD86 236 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 GAB4Q2WGN9 574 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 LY6G5CQ5SRR4 150 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 SDE2Q6IQ49 451 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 KLHDC10Q6PID8 442 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 RABEPKQ7Z6M1 372 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 CCDC33Q8N5R6 958 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 IL17RCQ8NAC3 791 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 TXNDC5Q8NBS9 432 aaKnown RBP15.59■□□□□ 0.09
HDAC6-204ENST00000376643 MDGA1Q8NFP4 955 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 SCAMP5Q8TAC9 235 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 PLEKHO2Q8TD55 490 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 HNRNPABQ99729 332 aaKnown RBP15.59■□□□□ 0.09
HDAC6-204ENST00000376643 LSM14BQ9BX40 385 aaKnown RBP15.59■□□□□ 0.09
HDAC6-204ENST00000376643 NIF3L1Q9GZT8 377 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 CYLDQ9NQC7 956 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 TMEM30AQ9NV96 361 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 ANGPTL2Q9UKU9 493 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 SCML2Q9UQR0 700 aa15.59■□□□□ 0.09
HDAC6-204ENST00000376643 A0A1B0GVL5 298 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 HLA-DRAP01903 254 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 HOXD12P35452 270 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 TIE1P35590 1138 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 PSMC2P35998 433 aaKnown RBP15.58■□□□□ 0.08
HDAC6-204ENST00000376643 ASPAP45381 313 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 MAP3K7CLP57077 242 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 SLC8A3P57103 927 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 LMAN2Q12907 356 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 CCDC6Q16204 474 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 ANO4Q32M45 955 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 SLC36A4Q6YBV0 504 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 PAQR9Q6ZVX9 377 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 HTR3DQ70Z44 454 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 TTC30AQ86WT1 665 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 GUF1Q8N442 669 aaKnown RBP15.58■□□□□ 0.08
HDAC6-204ENST00000376643 ALLCQ8N6M5 410 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 CHAMP1Q96JM3 812 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 ZFRQ96KR1 1074 aaKnown RBP15.58■□□□□ 0.08
HDAC6-204ENST00000376643 TPSD1Q9BZJ3 242 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 CCSER2Q9H7U1 834 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 HPSEQ9Y251 543 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 ZNF510Q9Y2H8 683 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 SPTBN2O15020 2390 aa15.58■□□□□ 0.08
HDAC6-204ENST00000376643 DCLK1O15075 740 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 RALAP11233 206 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 CCDC130P13994 396 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 HOXC13P31276 330 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 KIR2DL1P43626 348 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-204ENST00000376643 SLC6A11P48066 632 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 DHPSP49366 369 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-204ENST00000376643 DLG4P78352 724 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 KDSRQ06136 332 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 GRAMD4Q6IC98 578 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 BBS7Q8IWZ6 715 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 ETFBKMTQ8IXQ9 262 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 FAM186BQ8IYM0 893 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 PGBD3Q8N328 593 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 ARHGAP18Q8N392 663 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 ZNF513Q8N8E2 541 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-204ENST00000376643 TERB1Q8NA31 727 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 OLIG1Q8TAK6 271 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 CYFIP2Q96F07 1278 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 SMOQ99835 787 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 NUSAP1Q9BXS6 441 aaKnown RBP15.57■□□□□ 0.08
HDAC6-204ENST00000376643 GTPBP4Q9BZE4 634 aaKnown RBP15.57■□□□□ 0.08
HDAC6-204ENST00000376643 SDCBP2Q9H190 292 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 TMEM8AQ9HCN3 771 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms