RNA–Protein interactions for RNA: ENST00000375780.6

CLIC1-207, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-207ENST00000375780 PTK2Q05397 1052 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 USP4Q13107 963 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 RAPGEF1Q13905 1077 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 DPY19L2P1Q6NXN4 242 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 DDX42Q86XP3 938 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLIC1-207ENST00000375780 SIX5Q8N196 739 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 ARHGAP18Q8N392 663 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 KIAA1958Q8N8K9 716 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 KCTD13Q8WZ19 329 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 PBXIP1Q96AQ6 731 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 SLC22A12Q96S37 553 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 CYP2S1Q96SQ9 504 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 LRFN3Q9BTN0 628 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 SMG9Q9H0W8 520 aaKnown RBP12.58□□□□□ -0.4
CLIC1-207ENST00000375780 MFSD1Q9H3U5 465 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 CHORDC1Q9UHD1 332 aaPredicted RBP12.58□□□□□ -0.4
CLIC1-207ENST00000375780 PYCARDQ9ULZ3 195 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 FHOD1Q9Y613 1164 aa12.58□□□□□ -0.4
CLIC1-207ENST00000375780 CYP26A1O43174 497 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 THAP12O43422 761 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 TLR5O60602 858 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 TKTL1P51854 596 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 UBXN1Q04323 297 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 DRAP1Q14919 205 aaPredicted RBP12.57□□□□□ -0.4
CLIC1-207ENST00000375780 MLF2Q15773 248 aaPredicted RBP12.57□□□□□ -0.4
CLIC1-207ENST00000375780 ZNF77Q15935 545 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 FILIP1LQ4L180 1135 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 CC2D1AQ6P1N0 951 aaPredicted RBP12.57□□□□□ -0.4
CLIC1-207ENST00000375780 HFE2Q6ZVN8 426 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 TMC6Q7Z403 805 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 TADA2BQ86TJ2 420 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 GPIHBP1Q8IV16 184 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 SUGP1Q8IWZ8 645 aaKnown RBP12.57□□□□□ -0.4
CLIC1-207ENST00000375780 FAM71AQ8IYT1 594 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 SIX6OS1Q8N1H7 587 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 FBXL6Q8N531 539 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 UBA3Q8TBC4 463 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 CSGALNACT1Q8TDX6 532 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 SLC35F5Q8WV83 523 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 ZNF606Q8WXB4 792 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 HSFY1Q96LI6 401 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 ERGIC2Q96RQ1 377 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 CDK5RAP1Q96SZ6 601 aaKnown RBP12.57□□□□□ -0.4
CLIC1-207ENST00000375780 ZSWIM1Q9BR11 485 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 NAA15Q9BXJ9 866 aaKnown RBP12.57□□□□□ -0.4
CLIC1-207ENST00000375780 CYLDQ9NQC7 956 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 CLIC5Q9NZA1 410 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 AJAP1Q9UKB5 411 aaPredicted RBP12.57□□□□□ -0.4
CLIC1-207ENST00000375780 CA14Q9ULX7 337 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 CCL26Q9Y258 94 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 SIK3Q9Y2K2 1263 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 KMT2EQ8IZD2 1858 aa12.57□□□□□ -0.4
CLIC1-207ENST00000375780 FOXN3O00409 490 aaPredicted RBP12.56□□□□□ -0.4
CLIC1-207ENST00000375780 TEX33O43247 280 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 COCHO43405 550 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 ZBED1O96006 694 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 MBL2P11226 248 aaPredicted RBP12.56□□□□□ -0.4
CLIC1-207ENST00000375780 MLLT6P55198 1093 aaPredicted RBP12.56□□□□□ -0.4
CLIC1-207ENST00000375780 ADIGQ0VDE8 80 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 MTF1Q14872 753 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 NR1I3Q14994 352 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 SYCP1Q15431 976 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 SLC44A4Q53GD3 710 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 PM20D1Q6GTS8 502 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 KLHDC10Q6PID8 442 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 VSTM4Q8IW00 320 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 SCML4Q8N228 414 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 ZNF276Q8N554 614 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 SH3RF2Q8TEC5 729 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 SECISBP2LQ93073 1101 aaKnown RBP12.56□□□□□ -0.4
CLIC1-207ENST00000375780 MSANTD3Q96H12 275 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 PCMTD1Q96MG8 357 aaPredicted RBP12.56□□□□□ -0.4
CLIC1-207ENST00000375780 LRRC3BQ96PB8 259 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 STK33Q9BYT3 514 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 NACA2Q9H009 215 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 GANQ9H2C0 597 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 CNGB3Q9NQW8 809 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 FAM207AQ9NSI2 230 aaPredicted RBP12.56□□□□□ -0.4
CLIC1-207ENST00000375780 NAGPAQ9UK23 515 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 CPQQ9Y646 472 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 A0A1W2PQH9 124 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 KRBA1A5PL33 1030 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 TULP2O00295 520 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 ARNTLO00327 626 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 RALAP11233 206 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 GLULP15104 373 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 ACADSBP45954 432 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 PDGFRLQ15198 375 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 C1orf228Q6PIY5 440 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 NEK11Q8NG66 645 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 STK32AQ8WU08 396 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 ULBP1Q9BZM6 244 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 RNF38Q9H0F5 515 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 CCSER2Q9H7U1 834 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.56□□□□□ -0.4
CLIC1-207ENST00000375780 PCDHGC3Q9UN70 934 aa12.56□□□□□ -0.4
CLIC1-207ENST00000375780 F8VZ95 297 aa12.55□□□□□ -0.4
CLIC1-207ENST00000375780 LEFTY2O00292 366 aa12.55□□□□□ -0.4
CLIC1-207ENST00000375780 SART1O43290 800 aaKnown RBP12.55□□□□□ -0.4
CLIC1-207ENST00000375780 FBXO21O94952 628 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms