RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 C4orf50Q6ZRC1 276 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 PLD5Q8N7P1 536 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 SPATA33Q96N06 139 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 FBXO6Q9NRD1 293 aaPredicted RBP15.15■□□□□ 0.02
MSH5-201ENST00000375703 HEY1Q9Y5J3 304 aa15.15■□□□□ 0.02
MSH5-201ENST00000375703 FZD9O00144 591 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 GYG2O15488 501 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 GSC2O15499 205 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 CSDE1O75534 798 aaKnown RBP15.14■□□□□ 0.01
MSH5-201ENST00000375703 LUC7L3O95232 432 aaKnown RBP15.14■□□□□ 0.01
MSH5-201ENST00000375703 HPDLQ96IR7 371 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 SRPK1Q96SB4 655 aaKnown RBP15.14■□□□□ 0.01
MSH5-201ENST00000375703 CNTN3Q9P232 1028 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 E5RJQ4 531 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 KRT37O76014 449 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 SNRPAP09012 282 aaKnown RBP15.14■□□□□ 0.01
MSH5-201ENST00000375703 PAX7P23759 505 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 RBL1P28749 1068 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 YWHAZP63104 245 aaKnown RBP15.14■□□□□ 0.01
MSH5-201ENST00000375703 LGSNQ5TDP6 509 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 TRIM68Q6AZZ1 485 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 RFWD3Q6PCD5 774 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 FAM183BPQ6ZVS7 135 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.14■□□□□ 0.01
MSH5-201ENST00000375703 CXorf38Q8TB03 319 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 TRPM4Q8TD43 1214 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 SLC16A10Q8TF71 515 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 SKA1Q96BD8 255 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 FAM167BQ9BTA0 163 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 GGA3Q9NZ52 723 aa15.14■□□□□ 0.01
MSH5-201ENST00000375703 ZC3H7BQ9UGR2 993 aaKnown RBP15.14■□□□□ 0.01
MSH5-201ENST00000375703 USP2O75604 605 aaPredicted RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 PGK2P07205 417 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 MYL2P10916 166 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 IL4RP24394 825 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 PTDSS1P48651 473 aaKnown RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 NDST1P52848 882 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 BCAR1P56945 870 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 PDK2Q15119 407 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 KHDC1Q4VXA5 237 aaKnown RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 BOLA3Q53S33 107 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 FAXCQ5TGI0 409 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 PIWIL1Q96J94 861 aaKnown RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 MPHOSPH6Q99547 160 aaKnown RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 FRMD8Q9BZ67 464 aaPredicted RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 R3HDMLQ9H3Y0 253 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 SMARCAD1Q9H4L7 1026 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 PRMT7Q9NVM4 692 aaPredicted RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 GPATCH2LQ9NWQ4 482 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 BARX2Q9UMQ3 279 aaPredicted RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 TTLL3Q9Y4R7 772 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 C2orf71A6NGG8 1288 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 CXorf49A8MYA2 514 aaPredicted RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 TRDMT1O14717 391 aaKnown RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 HBP1O60381 514 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 ESRRAP11474 423 aaPredicted RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 TNFAIP2Q03169 654 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 CDHR3Q6ZTQ4 885 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.13■□□□□ 0.01
MSH5-201ENST00000375703 VPS52Q8N1B4 723 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 MICAL1Q8TDZ2 1067 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 PRR11Q96HE9 360 aaPredicted RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 TRIM6Q9C030 488 aaPredicted RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 MIS12Q9H081 205 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 KLC2Q9H0B6 622 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 VRTNQ9H8Y1 702 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 PPP1R1BQ9UD71 204 aaPredicted RBP15.13■□□□□ 0.01
MSH5-201ENST00000375703 TSPAN16Q9UKR8 245 aa15.13■□□□□ 0.01
MSH5-201ENST00000375703 FAM237BA0A1B0GVD1 139 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 SOCS7O14512 581 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 APOL1O14791 398 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 KLF11O14901 512 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 MAP3K6O95382 1288 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 ZBED1O96006 694 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 C1QAP02745 245 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 APRTP07741 180 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 CYP3A5P20815 502 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 OSBPP22059 807 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 CBLBQ13191 982 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 BLMHQ13867 455 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 KRT72Q14CN4 511 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 CCDC14Q49A88 953 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 CCDC62Q6P9F0 684 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 DSTYKQ6XUX3 929 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 ILDR2Q71H61 639 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 APBB1IPQ7Z5R6 666 aaPredicted RBP15.12■□□□□ 0.01
MSH5-201ENST00000375703 CAND1Q86VP6 1230 aaKnown RBP15.12■□□□□ 0.01
MSH5-201ENST00000375703 MCUR1Q96AQ8 359 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 OXNAD1Q96HP4 312 aaPredicted RBP15.12■□□□□ 0.01
MSH5-201ENST00000375703 ASB7Q9H672 318 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 IFT122Q9HBG6 1241 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 ETNK2Q9NVF9 386 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 IL1BP01584 269 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 TGM2P21980 687 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 ABL2P42684 1182 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 RGS7P49802 495 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 IGBP1P78318 339 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 LCLAT1Q6UWP7 414 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 GADL1Q6ZQY3 521 aa15.12■□□□□ 0.01
MSH5-201ENST00000375703 RINLQ6ZS11 566 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms