RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 SERPINA6P08185 405 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 HARSP12081 509 aaKnown RBP21.98■■□□□ 1.11
UPF3A-202ENST00000375299 ARHGAP8P85298 464 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 RASIP1Q5U651 963 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 XRRA1Q6P2D8 792 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 DENND1BQ6P3S1 775 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 ADGRG6Q86SQ4 1221 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 VSIG10LQ86VR7 867 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 RAB3IL1Q8TBN0 382 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 NCSTNQ92542 709 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 FAF2Q96CS3 445 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 TJP2Q9UDY2 1190 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 PCSK1NQ9UHG2 260 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 HBS1LQ9Y450 684 aaKnown RBP21.98■■□□□ 1.11
UPF3A-202ENST00000375299 RFPL1O75677 317 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 EDN1P05305 212 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 NAMPTP43490 491 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 MYL6P60660 151 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 YWHAZP63104 245 aaKnown RBP21.98■■□□□ 1.11
UPF3A-202ENST00000375299 CBLBQ13191 982 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 LAMB3Q13751 1172 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 LGSNQ5TDP6 509 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 AAGABQ6PD74 315 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 DARS2Q6PI48 645 aaKnown RBP21.98■■□□□ 1.11
UPF3A-202ENST00000375299 CMASQ8NFW8 434 aaPredicted RBP21.98■■□□□ 1.11
UPF3A-202ENST00000375299 CENPKQ9BS16 269 aa21.98■■□□□ 1.11
UPF3A-202ENST00000375299 ZNF277Q9NRM2 450 aaPredicted RBP21.98■■□□□ 1.11
UPF3A-202ENST00000375299 CXorf49A8MYA2 514 aaPredicted RBP21.97■■□□□ 1.11
UPF3A-202ENST00000375299 MAFGO15525 162 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 SNNO75324 88 aaPredicted RBP21.97■■□□□ 1.11
UPF3A-202ENST00000375299 AP3M2P53677 418 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 HNRNPDQ14103 355 aaKnown RBP21.97■■□□□ 1.11
UPF3A-202ENST00000375299 LIN52Q52LA3 116 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 RAPH1Q70E73 1250 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 SLC25A41Q8N5S1 370 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 HSPH1Q92598 858 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 APBB2Q92870 758 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 RILPQ96NA2 401 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 SLC13A1Q9BZW2 595 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 JPH1Q9HDC5 661 aaPredicted RBP21.97■■□□□ 1.11
UPF3A-202ENST00000375299 SLC4A7Q9Y6M7 1214 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 CYB561D2O14569 222 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 RNASEH1O60930 286 aaKnown RBP21.97■■□□□ 1.11
UPF3A-202ENST00000375299 NR3C2P08235 984 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 NOMO1Q15155 1222 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 TAF5Q15542 800 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 XKR3Q5GH77 459 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 NPNTQ6UXI9 565 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 ACAD11Q709F0 780 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 WDR49Q8IV35 697 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 BRSK2Q8IWQ3 736 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 EMC1Q8N766 993 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 MTMR14Q8NCE2 650 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 EBF3Q9H4W6 596 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 ZDHHC7Q9NXF8 308 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 STK32BQ9NY57 414 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 SOX13Q9UN79 622 aa21.97■■□□□ 1.11
UPF3A-202ENST00000375299 A0A1B0GVG6 124 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 PSMC1P62191 440 aaKnown RBP21.96■■□□□ 1.11
UPF3A-202ENST00000375299 WASHC5Q12768 1159 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 UBAP2LQ14157 1087 aaKnown RBP21.96■■□□□ 1.11
UPF3A-202ENST00000375299 LPAR1Q92633 364 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 CALN1Q9BXU9 219 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 MTMR12Q9C0I1 747 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 PORCNQ9H237 461 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 VCX3BQ9H321 246 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 S100A14Q9HCY8 104 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 VCX3AQ9NNX9 186 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 A0A088AWK7 358 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 MEI4A8MW99 385 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 ATG7O95352 703 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 ITGBL1O95965 494 aaPredicted RBP21.96■■□□□ 1.11
UPF3A-202ENST00000375299 PRKCHP24723 683 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 CPOXP36551 454 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 ACTR2P61160 394 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 YWHAEP62258 255 aaKnown RBP21.96■■□□□ 1.11
UPF3A-202ENST00000375299 DGKZQ13574 1117 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 HIC1Q14526 733 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 ABHD15Q6UXT9 468 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 RTKN2Q8IZC4 609 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 ST13P4Q8IZP2 240 aaPredicted RBP21.96■■□□□ 1.11
UPF3A-202ENST00000375299 OR6Y1Q8NGX8 325 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.96■■□□□ 1.11
UPF3A-202ENST00000375299 OLFM3Q96PB7 478 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 C20orf27Q9GZN8 174 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 ZCWPW1Q9H0M4 648 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 RSAD1Q9HA92 442 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 POPDC2Q9HBU9 364 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 CYTH4Q9UIA0 394 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 TBC1D30Q9Y2I9 924 aa21.96■■□□□ 1.11
UPF3A-202ENST00000375299 CTDP1Q9Y5B0 961 aaPredicted RBP21.96■■□□□ 1.11
UPF3A-202ENST00000375299 SDR42E2A6NKP2 422 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 BPGMP07738 259 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 AOC1P19801 751 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 MIPP30301 263 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 BMPR2Q13873 1038 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 BAATQ14032 418 aaPredicted RBP21.95■■□□□ 1.1
UPF3A-202ENST00000375299 SCARA5Q6ZMJ2 495 aa21.95■■□□□ 1.1
UPF3A-202ENST00000375299 MARK2Q7KZI7 788 aaKnown RBP21.95■■□□□ 1.1
UPF3A-202ENST00000375299 PDSS2Q86YH6 399 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms