RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 GLIS1Q8NBF1 620 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 FAF2Q96CS3 445 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SNRNP25Q9BV90 132 aaKnown RBP18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ADAM7Q9H2U9 754 aa18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CDC42EP4Q9H3Q1 356 aaKnown RBP18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.8■□□□□ 0.6
HLA-DQB1-201ENST00000374943 A6NNZ2 444 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 FAM200BP0CF97 657 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 PCSK1P29120 753 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ADIGQ0VDE8 80 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 KRT81Q14533 505 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 NOMO1Q15155 1222 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 KRT71Q3SY84 523 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 TUBB8Q3ZCM7 444 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 TIGD5Q53EQ6 642 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ZCCHC9Q8N567 271 aaKnown RBP18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 RNF157Q96PX1 679 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ZNF670Q9BS34 389 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 TMEM121Q9BTD3 319 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 PCDH18Q9HCL0 1135 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 HMX1Q9NP08 348 aaPredicted RBP18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 RGS18Q9NS28 235 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ZNF638Q14966 1978 aaKnown RBP18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 A0A1W2PQ45 241 aaPredicted RBP18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 A0A1W2PQY0 241 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SGK1O00141 431 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CLDN5O00501 218 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 MCF2LO15068 1137 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SHBGP04278 402 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 NR1D1P20393 614 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 IL4RP24394 825 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 MATKP42679 507 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 MRPS5P82675 430 aaKnown RBP18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ARHGEF6Q15052 776 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CCDC142Q17RM4 750 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 FAM35AQ86V20 835 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CCDC25Q86WR0 208 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 PAAF1Q9BRP4 392 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 MED10Q9BTT4 135 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 MAK16Q9BXY0 300 aaKnown RBP18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 KRT82Q9NSB4 513 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 DSEQ9UL01 958 aa18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 TPX2Q9ULW0 747 aaKnown RBP18.79■□□□□ 0.6
HLA-DQB1-201ENST00000374943 M0QZQ0 153 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 BEST1O76090 585 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 FBXO21O94952 628 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 POMCP01189 267 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 PECAM1P16284 738 aaPredicted RBP18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 TGM2P21980 687 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 GPS1Q13098 491 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 MMRN1Q13201 1228 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 MORF4L2Q15014 288 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 DPYSL2Q16555 572 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ERMARDQ5T6L9 678 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SLC9A4Q6AI14 798 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SCYL2Q6P3W7 929 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CD300LGQ6UXG3 332 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 RNF169Q8NCN4 708 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 MYCBPAPQ8TBZ2 947 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 PGM2Q96G03 612 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 TRPV6Q9H1D0 765 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 LRRC4Q9HBW1 653 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SAE1Q9UBE0 346 aaPredicted RBP18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SHOC2Q9UQ13 582 aa18.78■□□□□ 0.6
HLA-DQB1-201ENST00000374943 C9IYK1 514 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 EOMESO95936 686 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ZSCAN5DPP0CG00 497 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 CAPN2P17655 700 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 TFE3P19532 575 aaPredicted RBP18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 EIF3EP60228 445 aaKnown RBP18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SLC25A52Q3SY17 297 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 RNASEH2BQ5TBB1 312 aaKnown RBP18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 BNIPLQ7Z465 357 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 PCGF5Q86SE9 256 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 PRUNE1Q86TP1 453 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ARFGAP2Q8N6H7 521 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 NT5C3BQ969T7 300 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 TLCD1Q96CP7 247 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 PCED1BQ96HM7 432 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SLC2A13Q96QE2 648 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 SEZ6LQ9BYH1 1024 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ADAM33Q9BZ11 813 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 STARD7Q9NQZ5 370 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 PHF24Q9UPV7 400 aa18.77■□□□□ 0.6
HLA-DQB1-201ENST00000374943 ARHGEF37A1IGU5 675 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 MYBPHLA2RUH7 354 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 FKTNO75072 461 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 TTC4O95801 387 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ETS1P14921 441 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 MBTPS1Q14703 1052 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ANKRD20A8PQ5CZ79 823 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 ZC3H12AQ5D1E8 599 aaKnown RBP18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RAB41Q5JT25 222 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 METTL23Q86XA0 190 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PSTKQ8IV42 348 aaKnown RBP18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SIX6OS1Q8N1H7 587 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 PQLC3Q8N755 202 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 SMOQ99835 787 aa18.76■□□□□ 0.59
HLA-DQB1-201ENST00000374943 RTP3Q9BQQ7 232 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms