RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 OSBPL8Q9BZF1 889 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 CRISPLD1Q9H336 500 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 PLEKHA4Q9H4M7 779 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 CHST7Q9NS84 486 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 DDX56Q9NY93 547 aaKnown RBP16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 R3HDM2Q9Y2K5 976 aaKnown RBP16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 ADAM12O43184 909 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 PHF2O75151 1096 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 ZBED1O96006 694 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 KRT7P08729 469 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 KRT10P13645 584 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 GPR15P49685 360 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 CLCN6P51797 869 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 CMTR2Q8IYT2 770 aaKnown RBP16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 SLC39A11Q8N1S5 342 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 SCML4Q8N228 414 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 C12orf50Q8NA57 414 aaPredicted RBP16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 ATAD1Q8NBU5 361 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 FUBP3Q96I24 572 aaKnown RBP eCLIP16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 NPY6RQ99463 290 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 NGRNQ9NPE2 291 aaKnown RBP16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 ABI2Q9NYB9 513 aaPredicted RBP16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 AMACRQ9UHK6 382 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 NAALADL1Q9UQQ1 740 aa16.42■□□□□ 0.22
NIPAL3-204ENST00000374399 PLXNA3P51805 1871 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 hCG_1818297A0A087WSY0 165 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 MYBL2P10244 700 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 KDELR1P24390 212 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 PTGIRP43119 386 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 PGFP49763 221 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 TRADDQ15628 312 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 NFE2Q16621 373 aaPredicted RBP16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 HADHQ16836 314 aaKnown RBP16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 SLC25A52Q3SY17 297 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 ZNF365Q70YC5 407 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 CCDC50Q8IVM0 306 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 FAM149B1Q96BN6 582 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 RBM41Q96IZ5 413 aaKnown RBP16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 PGLYRP2Q96PD5 576 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 PLVAPQ9BX97 442 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 SLITRK6Q9H5Y7 841 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 CXXC1Q9P0U4 656 aaPredicted RBP16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 STIM2Q9P246 746 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 MYO16Q9Y6X6 1858 aa16.41■□□□□ 0.22
NIPAL3-204ENST00000374399 ZNF638Q14966 1978 aaKnown RBP16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 LRRD1A4D1F6 860 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 NOS2P35228 1153 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 GRIK1P39086 918 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 SLC5A3P53794 718 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 COPS2P61201 443 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 GPR17Q13304 367 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 BTG3Q14201 252 aaPredicted RBP16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 PPP2R5EQ16537 467 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 CA9Q16790 459 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 SDHAF4Q5VUM1 108 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 RNF19BQ6ZMZ0 732 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 STKLD1Q8NE28 680 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 MAGEB5Q9BZ81 275 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 LRRC19Q9H756 370 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 POPDC2Q9HBU9 364 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 GDF3Q9NR23 364 aa16.4■□□□□ 0.22
NIPAL3-204ENST00000374399 MTMR11A4FU01 709 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 IL4RP24394 825 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 MAGEA11P43364 429 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 HTRA4P83105 476 aaPredicted RBP16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 USP41Q3LFD5 358 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 DCAF6Q58WW2 860 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 TFDP3Q5H9I0 405 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 TMEM240Q5SV17 173 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 ANKS3Q6ZW76 656 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 STRADAQ7RTN6 431 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 COLGALT1Q8NBJ5 622 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 FAM71BQ8TC56 605 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 C1orf54Q8WWF1 131 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 ATG4AQ8WYN0 398 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 PIK3R5Q8WYR1 880 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 IRGQQ8WZA9 623 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 HSPH1Q92598 858 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 C8orf48Q96LL4 319 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 GPATCH2LQ9NWQ4 482 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 ZNF446Q9NWS9 450 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 MTRRQ9UBK8 725 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 PCYOX1Q9UHG3 505 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 PCDHB5Q9Y5E4 795 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 GOLGA6L10A0A0M3HER8 536 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 H7C4K7 107 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 TTI1O43156 1089 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 HEXIM1O94992 359 aaKnown RBP16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 FGBP02675 491 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 LTFP02788 710 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 COILP38432 576 aaPredicted RBP16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 SULT1E1P49888 294 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 ARPP19P56211 112 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 FPGSQ05932 587 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 PPIGQ13427 754 aaKnown RBP eCLIP16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 SMC1AQ14683 1233 aaKnown RBP16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 DDR2Q16832 855 aa16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 ZC3H12AQ5D1E8 599 aaKnown RBP16.39■□□□□ 0.21
NIPAL3-204ENST00000374399 SLC8B1Q6J4K2 584 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms