RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 ARL4AP40617 200 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 BCAR1P56945 870 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 LILRA4P59901 499 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 EIF3EP60228 445 aaKnown RBP9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 OTUD4Q01804 1114 aaKnown RBP9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 OGDHQ02218 1023 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 DNAJC3Q13217 504 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 SNX1Q13596 522 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 SOWAHAQ2M3V2 549 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 ARL13BQ3SXY8 428 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 CCDC38Q502W7 563 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 FAM26DQ5JW98 314 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 SPDYAQ5MJ70 313 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 CST9Q5W186 159 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 RGS9BPQ6ZS82 235 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 SERINC5Q86VE9 423 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 METTL23Q86XA0 190 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 MYCBPAPQ8TBZ2 947 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 ACTL9Q8TC94 416 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 DNAJB3Q8WWF6 145 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 ARHGEF2Q92974 986 aaKnown RBP9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 NT5C3BQ969T7 300 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 NTAN1Q96AB6 310 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 PPP1R10Q96QC0 940 aaKnown RBP9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 XPO6Q96QU8 1125 aaKnown RBP9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 CYTH2Q99418 400 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 OSMRQ99650 979 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 HINFPQ9BQA5 517 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 C11orf84Q9BUA3 381 aaPredicted RBP9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 ZWILCHQ9H900 591 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 RRAGCQ9HB90 399 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 XAB2Q9HCS7 855 aaKnown RBP9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 AAASQ9NRG9 546 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 SAMD15Q9P1V8 674 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 CHORDC1Q9UHD1 332 aaPredicted RBP9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 CPA4Q9UI42 421 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 IPPQ9Y573 584 aa9.09□□□□□ -0.95
SNRNP40-202ENST00000373720 TRPM7Q96QT4 1865 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 MCM3APO60318 1980 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 EXOC1LA0A1B0GW35 172 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 CARNS1A5YM72 827 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 ERI2A8K979 691 aaKnown RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 E5RJQ4 531 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 TM9SF1O15321 606 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 DAB1O75553 588 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 PFKMP08237 780 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 MYL3P08590 195 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 GHRP10912 638 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 NPR3P17342 541 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 TPSB2P20231 275 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 CNTFP26441 200 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 HPDP32754 393 aaPredicted RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 STX2P32856 288 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 FDFT1P37268 417 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 MAGEA9P43362 315 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 CDH6P55285 790 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 PRMT2P55345 433 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 GEMIN4P57678 1058 aaKnown RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 CORO7P57737 925 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 YWHAZP63104 245 aaKnown RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 IL9RQ01113 521 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 RNASELQ05823 741 aaKnown RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 PTK7Q13308 1070 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 NAB1Q13506 487 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 DPYSL3Q14195 570 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 TPSAB1Q15661 275 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 DBN1Q16643 649 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 CCDC14Q49A88 953 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 UBXN11Q5T124 520 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 PPP1R26Q5T8A7 1209 aaPredicted RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 CYP4A22Q5TCH4 519 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 TWF2Q6IBS0 349 aaKnown RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 FAM183BPQ6ZVS7 135 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 CCDC25Q86WR0 208 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 RFX6Q8HWS3 928 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 LRRC49Q8IUZ0 686 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 ADGRF2Q8IZF7 708 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 CACNA2D3Q8IZS8 1091 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 NAT8LQ8N9F0 302 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 B3GALNT2Q8NCR0 500 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 JOSD2Q8TAC2 188 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 ZNF473Q8WTR7 871 aaKnown RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 PYROXD1Q8WU10 500 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 MTBPQ96DY7 904 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 CABS1Q96KC9 395 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 CEP295NLQ96MC4 621 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 ZMAT2Q96NC0 199 aaKnown RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 TWNKQ96RR1 684 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 VAT1Q99536 393 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 ACBD6Q9BR61 282 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 TSEN34Q9BSV6 310 aaKnown RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 CALN1Q9BXU9 219 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 FAM49AQ9H0Q0 323 aaPredicted RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 ADAM7Q9H2U9 754 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 KDM4CQ9H3R0 1056 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 EIF2B3Q9NR50 452 aaKnown RBP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 NINJ2Q9NZG7 142 aa9.08□□□□□ -0.96
SNRNP40-202ENST00000373720 FNIP2Q9P278 1114 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms