RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 ANKMY2Q8IV38 441 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 OTUB1Q96FW1 271 aaPredicted RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 FAM192AQ9GZU8 254 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 ST6GALNAC4Q9H4F1 302 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 GEMIN8Q9NWZ8 242 aaKnown RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 CHCHD3Q9NX63 227 aaKnown RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 PGAP2Q9UHJ9 254 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 SNX9Q9Y5X1 595 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 TTC36A6NLP5 189 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 B2RBV5 119 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 MEIS2O14770 477 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 CHADO15335 359 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 MAP3K13O43283 966 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 E2F6O75461 281 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 NOVP48745 357 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 PDAP1Q13442 181 aaKnown RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 NUDT18Q6ZVK8 323 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 ZNF572Q7Z3I7 529 aaPredicted RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 UNC93AQ86WB7 457 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 RASGEF1CQ8N431 466 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 RYBPQ8N488 228 aaPredicted RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 SYTL5Q8TDW5 730 aaPredicted RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 TMEM176AQ96HP8 235 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 AP4S1Q9Y587 144 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 TBC1D4O60343 1298 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 ANP32DO95626 131 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 PLEKP08567 350 aaPredicted RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 SERPINB3P29508 390 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 DSG3P32926 999 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 RARRES1P49788 294 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 PSMD7P51665 324 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 HADHBP55084 474 aaKnown RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 MGAT5Q09328 741 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 CYLC2Q14093 348 aaPredicted RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 RABGAP1LQ5R372 815 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 MRNIPQ6NTE8 343 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 EEPD1Q7L9B9 569 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 TRIM69Q86WT6 500 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 MAGEC3Q8TD91 643 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 DLG3Q92796 817 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 CXorf56Q9H5V9 222 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 PMM2O15305 246 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 CYBBP04839 570 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 ENO1P06733 434 aaKnown RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 OXCT1P55809 520 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 PURAQ00577 322 aaKnown RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 ZNF844Q08AG5 666 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 CCDC15Q0P6D6 951 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 PTP4A2Q12974 167 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 PGM5Q15124 567 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 SNX19Q92543 992 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 CELF4Q9BZC1 486 aaKnown RBP10.97□□□□□ -0.65
PGK1-201ENST00000373316 SMYD3Q9H7B4 428 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 VTA1Q9NP79 307 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 GPRC5DQ9NZD1 345 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 MAPRE3Q9UPY8 281 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 CHMP2BQ9UQN3 213 aa10.97□□□□□ -0.65
PGK1-201ENST00000373316 TRIM49D1C9J1S8 452 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 FAM86B1E9PN63 330 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 SLITRK3O94933 977 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 FAM86B2P0C5J1 330 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 LCP1P13796 627 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 XIAPP98170 497 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 AMPD2Q01433 879 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 C1orf186Q6ZWK4 172 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 NCLNQ969V3 563 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 SYTL2Q9HCH5 934 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 NMRK1Q9NWW6 199 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 RABGEF1Q9UJ41 708 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 BARX2Q9UMQ3 279 aaPredicted RBP10.96□□□□□ -0.65
PGK1-201ENST00000373316 MROH7Q68CQ1 1323 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 ATRNL1Q5VV63 1379 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 H0Y626 953 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 H3BQF6 201 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 TRIM16O95361 564 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 TTLL9Q3SXZ7 439 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 MIIPQ5JXC2 388 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 PHF13Q86YI8 300 aaPredicted RBP10.96□□□□□ -0.65
PGK1-201ENST00000373316 TTC16Q8NEE8 873 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 MTMR8Q96EF0 704 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 KRT82Q9NSB4 513 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 KCNK4Q9NYG8 393 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 PCDHGB4Q9UN71 923 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 PIN4Q9Y237 131 aaKnown RBP10.96□□□□□ -0.65
PGK1-201ENST00000373316 RIPK3Q9Y572 518 aa10.96□□□□□ -0.65
PGK1-201ENST00000373316 H0Y3Z8 333 aa10.96□□□□□ -0.66
PGK1-201ENST00000373316 PGAM1P18669 254 aa10.96□□□□□ -0.66
PGK1-201ENST00000373316 CRABP2P29373 138 aa10.96□□□□□ -0.66
PGK1-201ENST00000373316 TCF7P36402 384 aaPredicted RBP10.96□□□□□ -0.66
PGK1-201ENST00000373316 GTF2A2P52657 109 aa10.96□□□□□ -0.66
PGK1-201ENST00000373316 MSLNQ13421 630 aaPredicted RBP10.96□□□□□ -0.66
PGK1-201ENST00000373316 BIRC2Q13490 618 aa10.96□□□□□ -0.66
PGK1-201ENST00000373316 SLC45A4Q5BKX6 768 aa10.96□□□□□ -0.66
PGK1-201ENST00000373316 SYCP2LQ5T4T6 812 aa10.96□□□□□ -0.66
PGK1-201ENST00000373316 LCA5Q86VQ0 697 aa10.96□□□□□ -0.66
PGK1-201ENST00000373316 ZBED3Q96IU2 234 aaPredicted RBP10.96□□□□□ -0.66
PGK1-201ENST00000373316 PAFAH2Q99487 392 aa10.96□□□□□ -0.66
PGK1-201ENST00000373316 CPNE1Q99829 537 aa10.96□□□□□ -0.66
PGK1-201ENST00000373316 TASP1Q9H6P5 420 aa10.96□□□□□ -0.66
PGK1-201ENST00000373316 OLA1Q9NTK5 396 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms