RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 JMJD4Q9H9V9 463 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 LIMD1Q9UGP4 676 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 CBX6O95503 412 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 MAGP20916 626 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 CCNG1P51959 295 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 PLCL1Q15111 1095 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 FAM98BQ52LJ0 330 aaKnown RBP9.52□□□□□ -0.88
PTPRT-205ENST00000373193 STK32CQ86UX6 486 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 FAM210AQ96ND0 272 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 ZNF180Q9UJW8 692 aa9.52□□□□□ -0.88
PTPRT-205ENST00000373193 FAM220BPB1ANY3 271 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 PKNOX1P55347 436 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 QPRTQ15274 297 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 HIST2H2ACQ16777 129 aaPredicted RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 HIST2H2AA3Q6FI13 130 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 CAMKK1Q8N5S9 505 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 LEMD2Q8NC56 503 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 TFB1MQ8WVM0 346 aaKnown RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 SEPT5Q99719 369 aaPredicted RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 CCDC28BQ9BUN5 200 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 TFECO14948 347 aaPredicted RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 PCCAP05165 728 aaPredicted RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 FASP25445 335 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 IQSEC1Q6DN90 963 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 TMEM143Q96AN5 459 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 VPS33AQ96AX1 596 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 RNF145Q96MT1 663 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 FAM192AQ9GZU8 254 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 TNPO2O14787 897 aaKnown RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 AKAP14Q86UN6 197 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 ZNF224Q9NZL3 707 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 PHF11Q9UIL8 331 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 PEG3Q9GZU2 1588 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 NCOA4Q13772 614 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 USF2Q15853 346 aaPredicted RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 WDR72Q3MJ13 1102 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 ZIK1Q3SY52 487 aaPredicted RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 DCAF6Q58WW2 860 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 SPPL2AQ8TCT8 520 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 B3GALT6Q96L58 329 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 GORASP1Q9BQQ3 440 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 LRCH1Q9Y2L9 728 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 RPS6KL1Q9Y6S9 549 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 KPNA5O15131 536 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 FOXP2O15409 715 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 SH3BGRLO75368 114 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 HPGDP15428 266 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 PEG10Q86TG7 708 aaKnown RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 SVOPQ8N4V2 548 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 NUP160Q12769 1436 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 SASH1O94885 1247 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 CDH3P22223 829 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 EFL1Q7Z2Z2 1120 aaKnown RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 ARHGEF19Q8IW93 802 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 TRIM48Q8IWZ4 208 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 YAF2Q8IY57 180 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 FAM172AQ8WUF8 416 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 DCAF4Q8WV16 495 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 FAM120BQ96EK7 910 aaKnown RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 PCDHGA4Q9Y5G9 962 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 TOPBP1Q92547 1522 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 GCC2Q8IWJ2 1684 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 A0A087X0T9 212 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 FAM92AA1XBS5 289 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 LIN7AO14910 233 aaPredicted RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 TP73O15350 636 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 HOXA7P31268 230 aaPredicted RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 FMO5P49326 533 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 ALDH5A1P51649 535 aaPredicted RBP9.52□□□□□ -0.89
PTPRT-205ENST00000373193 AGAP9Q5VTM2 703 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 RNF44Q7L0R7 432 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 HPS6Q86YV9 775 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 KRT35Q92764 455 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 CLIC5Q9NZA1 410 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 MYH6P13533 1939 aa9.52□□□□□ -0.89
PTPRT-205ENST00000373193 MGAT4DA6NG13 374 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 H2AFYO75367 372 aaKnown RBP9.51□□□□□ -0.89
PTPRT-205ENST00000373193 PTPN4P29074 926 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 CCDC153Q494R4 210 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 ANKS6Q68DC2 871 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 SNRNP48Q6IEG0 339 aaKnown RBP9.51□□□□□ -0.89
PTPRT-205ENST00000373193 ENOSF1Q7L5Y1 443 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 STRA8Q7Z7C7 330 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 BHLHE22Q8NFJ8 381 aaPredicted RBP9.51□□□□□ -0.89
PTPRT-205ENST00000373193 ZNF184Q99676 751 aaPredicted RBP9.51□□□□□ -0.89
PTPRT-205ENST00000373193 RRN3Q9NYV6 651 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 TRAP1Q12931 704 aaKnown RBP9.51□□□□□ -0.89
PTPRT-205ENST00000373193 PIGHQ14442 188 aaPredicted RBP9.51□□□□□ -0.89
PTPRT-205ENST00000373193 FBXO36Q8NEA4 188 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 LENG1Q96BZ8 264 aaPredicted RBP9.51□□□□□ -0.89
PTPRT-205ENST00000373193 PHACTR1Q9C0D0 580 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 LY9Q9HBG7 655 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 TMBIM4Q9HC24 238 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 A0A1B0GTH6 734 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 ERI2A8K979 691 aaKnown RBP9.51□□□□□ -0.89
PTPRT-205ENST00000373193 DHFR2Q86XF0 187 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 SLC44A5Q8NCS7 719 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 FAM81AQ8TBF8 368 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 MARK4Q96L34 752 aa9.51□□□□□ -0.89
PTPRT-205ENST00000373193 ING4Q9UNL4 249 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms