RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 UGT1A8Q9HAW9 530 aa15.41■□□□□ 0.06
COL9A2-202ENST00000372748 TNS1Q9HBL0 1735 aaKnown RBP15.41■□□□□ 0.06
COL9A2-202ENST00000372748 CST3P01034 146 aaPredicted RBP15.4■□□□□ 0.06
COL9A2-202ENST00000372748 RBP3P10745 1247 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 CRABP2P29373 138 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 CDK7P50613 346 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 NCOA4Q13772 614 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 NPNTQ6UXI9 565 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 ABHD15Q6UXT9 468 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 RASSF3Q86WH2 238 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 WDTC1Q8N5D0 677 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 POU5F2Q8N7G0 328 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 DRAXINQ8NBI3 349 aaPredicted RBP15.4■□□□□ 0.06
COL9A2-202ENST00000372748 CCDC124Q96CT7 223 aaKnown RBP15.4■□□□□ 0.06
COL9A2-202ENST00000372748 CALN1Q9BXU9 219 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 FBXO40Q9UH90 709 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 K7ERI5 159 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 LRCH4O75427 683 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 MRPS5P82675 430 aaKnown RBP15.4■□□□□ 0.06
COL9A2-202ENST00000372748 PDE1BQ01064 536 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 DYNC1I2Q13409 638 aaKnown RBP15.4■□□□□ 0.06
COL9A2-202ENST00000372748 FAXCQ5TGI0 409 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 LRRN4Q8WUT4 740 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 HSPH1Q92598 858 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 MSTO1Q9BUK6 570 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 WWP1Q9H0M0 922 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 POLIQ9UNA4 740 aa15.4■□□□□ 0.06
COL9A2-202ENST00000372748 A6NJR5 290 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 NDC80O14777 642 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 C6orf222P0C671 652 aaPredicted RBP15.39■□□□□ 0.05
COL9A2-202ENST00000372748 PTPN7P35236 360 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 EPHB1P54762 984 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 BACE1P56817 501 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 SLC25A11Q02978 314 aaKnown RBP15.39■□□□□ 0.05
COL9A2-202ENST00000372748 TMEM132BQ14DG7 1078 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 SCARA5Q6ZMJ2 495 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 BBS12Q6ZW61 710 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 NUDCD3Q8IVD9 361 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 DEPTORQ8TB45 409 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 SPATA18Q8TC71 538 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 TFAP2BQ92481 460 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 PLLPQ9Y342 182 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 TTLL13PA6NNM8 815 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 BUD23O43709 281 aaKnown RBP15.39■□□□□ 0.05
COL9A2-202ENST00000372748 STAM2O75886 525 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 KDELR1P24390 212 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 TBC1D25Q3MII6 688 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 RALGPS1Q5JS13 557 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 RNF111Q6ZNA4 994 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 EFCAB3Q8N7B9 438 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 KCTD6Q8NC69 237 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 TMEM35BQ8NCS4 154 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 SLC26A7Q8TE54 656 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 CCDC106Q9BWC9 280 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 TEX264Q9Y6I9 313 aa15.39■□□□□ 0.05
COL9A2-202ENST00000372748 PDE5AO76074 875 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 STK10O94804 968 aaKnown RBP15.38■□□□□ 0.05
COL9A2-202ENST00000372748 MAP3K6O95382 1288 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 TBXAS1P24557 533 aaPredicted RBP15.38■□□□□ 0.05
COL9A2-202ENST00000372748 HIRAP54198 1017 aaPredicted RBP15.38■□□□□ 0.05
COL9A2-202ENST00000372748 ASPHQ12797 758 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 SFT2D3Q587I9 215 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 XKR3Q5GH77 459 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 FAM91A1Q658Y4 838 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 FAM43BQ6ZT52 329 aaPredicted RBP15.38■□□□□ 0.05
COL9A2-202ENST00000372748 SLC26A11Q86WA9 606 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 OR6Y1Q8NGX8 325 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 PPP2R3CQ969Q6 453 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 MMP19Q99542 508 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 CENPKQ9BS16 269 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 HACL1Q9UJ83 578 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 ZNF214Q9UL59 606 aaPredicted RBP15.38■□□□□ 0.05
COL9A2-202ENST00000372748 A0A088AWK7 358 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 A0A0B4J269 797 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 IRF6O14896 467 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 KLF11O14901 512 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 MAFGO15525 162 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 DKC1O60832 514 aaKnown RBP eCLIP15.38■□□□□ 0.058e-10■■■■■ 46.1
COL9A2-202ENST00000372748 STIP1P31948 543 aaKnown RBP15.38■□□□□ 0.05
COL9A2-202ENST00000372748 CCNFP41002 786 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 GRIA2P42262 883 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 MMRN1Q13201 1228 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 TNFAIP1Q13829 316 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 DNAL1Q4LDG9 190 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 LRRC23Q53EV4 343 aaPredicted RBP15.38■□□□□ 0.05
COL9A2-202ENST00000372748 TTC39BQ5VTQ0 682 aaPredicted RBP15.38■□□□□ 0.05
COL9A2-202ENST00000372748 MARK2Q7KZI7 788 aaKnown RBP15.38■□□□□ 0.05
COL9A2-202ENST00000372748 ZBTB33Q86T24 672 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 JDP2Q8WYK2 163 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 C7orf26Q96N11 449 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 APOL6Q9BWW8 343 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 OR6B1O95007 311 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 SUPT20HL2P0C7V6 817 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 KRT3P12035 628 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 TNFSF9P41273 254 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 AQP4P55087 323 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 SUPT20HL1Q3ZLR7 823 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 DARS2Q6PI48 645 aaKnown RBP15.38■□□□□ 0.05
COL9A2-202ENST00000372748 SESTD1Q86VW0 696 aa15.38■□□□□ 0.05
COL9A2-202ENST00000372748 CRLF3Q8IUI8 442 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms