RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 SNRPAP09012 282 aaKnown RBP10.03□□□□□ -0.8
LRRC40-201ENST00000370952 SETSIPP0DME0 302 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 AOC1P19801 751 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 MMP8P22894 467 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 IL1R2P27930 398 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 ALDH1A3P47895 512 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 COPAP53621 1224 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 RPL10AP62906 217 aaKnown RBP10.03□□□□□ -0.8
LRRC40-201ENST00000370952 SNAPC2Q13487 334 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 VWA5B1Q5TIE3 1220 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 NPNTQ6UXI9 565 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 USP37Q86T82 979 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 NDUFAF2Q8N183 169 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 ACER1Q8TDN7 264 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 LRRN4Q8WUT4 740 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 ZNF606Q8WXB4 792 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 DCUN1D1Q96GG9 259 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 VCPIP1Q96JH7 1222 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 FBXL18Q96ME1 805 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 CATSPER2Q96P56 530 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 RIT2Q99578 217 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 CDCA7Q9BWT1 371 aaPredicted RBP10.03□□□□□ -0.8
LRRC40-201ENST00000370952 ST6GALNAC4Q9H4F1 302 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 EPB41L1Q9H4G0 881 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 FAM198AQ9UFP1 575 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 PCSK1NQ9UHG2 260 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 TDRKHQ9Y2W6 561 aaKnown RBP10.03□□□□□ -0.8
LRRC40-201ENST00000370952 TTLL3Q9Y4R7 772 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 PCDHGA4Q9Y5G9 962 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 GMEB1Q9Y692 573 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 TEX264Q9Y6I9 313 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 SF3B1O75533 1304 aaKnown RBP eCLIP10.03□□□□□ -0.83e-6■■■■■ 97.6
LRRC40-201ENST00000370952 A0A0B4J269 797 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 A0A1B0GTW7 788 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 C3orf70A6NLC5 250 aaPredicted RBP10.03□□□□□ -0.8
LRRC40-201ENST00000370952 H3BNX3 289 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 DHX15O43143 795 aaKnown RBP10.03□□□□□ -0.8
LRRC40-201ENST00000370952 KRT37O76014 449 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 RBP3P10745 1247 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 CRKP46108 304 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 EIF3EP60228 445 aaKnown RBP10.03□□□□□ -0.8
LRRC40-201ENST00000370952 COG7P83436 770 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 DMP1Q13316 513 aaPredicted RBP10.03□□□□□ -0.8
LRRC40-201ENST00000370952 TUBB3Q13509 450 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 TAF5Q15542 800 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 TRIM72Q6ZMU5 477 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 RFX6Q8HWS3 928 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 TRIM42Q8IWZ5 723 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 ZNF513Q8N8E2 541 aaPredicted RBP10.03□□□□□ -0.8
LRRC40-201ENST00000370952 GAB3Q8WWW8 586 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 HSPBAP1Q96EW2 488 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 XPNPEP1Q9NQW7 623 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 TMOD2Q9NZR1 351 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 NUB1Q9Y5A7 615 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 AK5Q9Y6K8 562 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 STRCQ7RTU9 1775 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 TTC36A6NLP5 189 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 NDC80O14777 642 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 DNAJA2O60884 412 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 SIN3BO75182 1162 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 SNNO75324 88 aaPredicted RBP10.02□□□□□ -0.8
LRRC40-201ENST00000370952 TRPA1O75762 1119 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 C1QAP02745 245 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 BPGMP07738 259 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 NCF2P19878 526 aaPredicted RBP10.02□□□□□ -0.8
LRRC40-201ENST00000370952 MSX2P35548 267 aaPredicted RBP10.02□□□□□ -0.8
LRRC40-201ENST00000370952 EMP3P54852 163 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 CYLC2Q14093 348 aaPredicted RBP10.02□□□□□ -0.8
LRRC40-201ENST00000370952 ACAP1Q15027 740 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 SMAD1Q15797 465 aaKnown RBP10.02□□□□□ -0.8
LRRC40-201ENST00000370952 TBCCQ15814 346 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 MEX3CQ5U5Q3 659 aaKnown RBP10.02□□□□□ -0.8
LRRC40-201ENST00000370952 PGM2L1Q6PCE3 622 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 C15orf39Q6ZRI6 1047 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 TTC13Q8NBP0 860 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 MRPL1Q9BYD6 325 aaKnown RBP10.02□□□□□ -0.8
LRRC40-201ENST00000370952 RBM38Q9H0Z9 239 aaKnown RBP10.02□□□□□ -0.8
LRRC40-201ENST00000370952 LIN28AQ9H9Z2 209 aaKnown RBP10.02□□□□□ -0.8
LRRC40-201ENST00000370952 C17orf75Q9HAS0 396 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 IFT122Q9HBG6 1241 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 FBXO28Q9NVF7 368 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 TJP2Q9UDY2 1190 aa10.02□□□□□ -0.8
LRRC40-201ENST00000370952 TTLL13PA6NNM8 815 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 H3BSA7 217 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 ZC3H11AO75152 810 aaKnown RBP eCLIP10.02□□□□□ -0.81
LRRC40-201ENST00000370952 MAP3K6O95382 1288 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 CSH1P0DML2 217 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 CSH2P0DML3 217 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 ITGAXP20702 1163 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 KCNA4P22459 653 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 PSMA2P25787 234 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 SLC5A2P31639 672 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 ATXN3P54252 364 aaPredicted RBP10.02□□□□□ -0.81
LRRC40-201ENST00000370952 NLRP11P59045 1033 aaKnown RBP10.02□□□□□ -0.81
LRRC40-201ENST00000370952 SNRPFP62306 86 aaKnown RBP10.02□□□□□ -0.81
LRRC40-201ENST00000370952 MYBPC1Q00872 1141 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 WASHC5Q12768 1159 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 CNGA3Q16281 694 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 ZACNQ401N2 412 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 SH3D19Q5HYK7 790 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms