RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 ADKP55263 362 aaKnown RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 SUMO1P63165 101 aaKnown RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 LLGL1Q15334 1064 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 SYCP1Q15431 976 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 CCDC85BQ15834 202 aaPredicted RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 ZACNQ401N2 412 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 TCTE1Q5JU00 501 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 AADACL4Q5VUY2 407 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 NPNTQ6UXI9 565 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 CHST3Q7LGC8 479 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 CYP2U1Q7Z449 544 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 AOPEPQ8N6M6 819 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 NLGN2Q8NFZ4 835 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 C19orf60Q96EN9 201 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 NRBF2Q96F24 287 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 NEIL1Q96FI4 390 aaPredicted RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 UBAC1Q9BSL1 405 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 B3GNT5Q9BYG0 378 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 DENND2DQ9H6A0 471 aaPredicted RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 CBX8Q9HC52 389 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 ADARB2Q9NS39 739 aaKnown RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 TMEM184CQ9NVA4 438 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 GDAP2Q9NXN4 497 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 MCM3APO60318 1980 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 TRAV6A0A075B6T7 132 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 UBXN7O94888 489 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 EGFRP00533 1210 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 HLA-DOAP06340 250 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 HEXBP07686 556 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 HOXC6P09630 235 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 RARBP10826 455 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 HSPA7P48741 367 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 CCT8P50990 548 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 GDF10P55107 478 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 HDAC4P56524 1084 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 CCZ1BP86790 482 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 CCZ1P86791 482 aaPredicted RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 PPARDQ03181 441 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 PPATQ06203 517 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 MAPK7Q13164 816 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 PPIL2Q13356 520 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 SLC39A12Q504Y0 691 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 FAM47AQ5JRC9 791 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 FAM209BQ5JX69 171 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 SH3PXD2AQ5TCZ1 1133 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 ZNF658Q5TYW1 1059 aaPredicted RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 CLEC2AQ6UVW9 174 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 LRIG3Q6UXM1 1119 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 LRRC55Q6ZSA7 311 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 C11orf57Q6ZUT1 292 aaPredicted RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 TMC6Q7Z403 805 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 CNTN4Q8IWV2 1026 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 FBXW8Q8N3Y1 598 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 PPP1R14CQ8TAE6 165 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 ACMSDQ8TDX5 336 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 KHSRPQ92945 711 aaKnown RBP eCLIP4.14□□□□□ -1.75
MCF2-203ENST00000370576 MRGPRX3Q96LB0 322 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 INPP4AQ96PE3 977 aaPredicted RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 NFKBIZQ9BYH8 718 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 CD244Q9BZW8 370 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 FTOQ9C0B1 505 aaKnown RBP eCLIP4.14□□□□□ -1.75
MCF2-203ENST00000370576 GJB4Q9NTQ9 266 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 MOCS1Q9NZB8 636 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 SEPT10Q9P0V9 454 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 COL4A2P08572 1712 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 HNRNPCL2B2RXH8 293 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 F5H6K3 240 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 POTEB2H3BUK9 544 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 AP3D1O14617 1153 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 EIF3DO15371 548 aaKnown RBP eCLIP4.14□□□□□ -1.75
MCF2-203ENST00000370576 HNRNPCL1O60812 293 aaKnown RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 SOD2P04179 222 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 TSPY3P0CV98 308 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 TSPY8P0CW00 308 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 PYGMP11217 842 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 CD44P16070 742 aaKnown RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 RPA1P27694 616 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 TIE1P35590 1138 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 BMPR1AP36894 532 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 OR1G1P47890 313 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 KCNJ4P48050 445 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 MTNR1BP49286 362 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 ZNF75DP51815 510 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 ICA1Q05084 483 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 KLRC3Q07444 240 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 ADCY2Q08462 1091 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 TNFAIP1Q13829 316 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 TARBP2Q15633 366 aaKnown RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 AAK1Q2M2I8 961 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 QRICH1Q2TAL8 776 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 ASTE1Q2TB18 679 aaPredicted RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 CERKLQ49MI3 558 aaPredicted RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 RNF220Q5VTB9 566 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 OTOP1Q7RTM1 612 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 NEK8Q86SG6 692 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 RIOX2Q8IUF8 465 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 DNERQ8NFT8 737 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 TNIP2Q8NFZ5 429 aa4.14□□□□□ -1.75
MCF2-203ENST00000370576 NOC3LQ8WTT2 800 aaKnown RBP4.14□□□□□ -1.75
MCF2-203ENST00000370576 LRGUKQ96M69 825 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms