RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 APOEP02649 317 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 ERFP50548 548 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 MRPS6P82932 125 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 YWHAHQ04917 246 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 ZNF792Q3KQV3 632 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 AGBL2Q5U5Z8 902 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 SDHAF4Q5VUM1 108 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 KCNT2Q6UVM3 1135 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 EXT2Q93063 718 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 LBHD1Q9BQE6 289 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 NAALADL1Q9UQQ1 740 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 COL2A1P02458 1487 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 NT5C1B-RDH14C9J2C7 533 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 SCAMP3O14828 347 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 JCHAINP01591 159 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 EDNRBP24530 442 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 ETFBP38117 255 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 CRYBB1P53674 252 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 NRLP54845 237 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 PRKCZQ05513 592 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 PTK7Q13308 1070 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 DEFB115Q30KQ5 88 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 C10orf120Q5SQS8 335 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 ERMARDQ5T6L9 678 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 LDLRAD1Q5T700 205 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 C9orf57Q5W0N0 161 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 IQCKQ8N0W5 287 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 RASGEF1CQ8N431 466 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 IPMKQ8NFU5 416 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 TFB1MQ8WVM0 346 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 SNRNP25Q9BV90 132 aaKnown RBP7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 PCDHB7Q9Y5E2 793 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 THSD7AQ9UPZ6 1657 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 SMIM35A0A1B0GVV1 85 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 IGF2BP3O00425 579 aaKnown RBP eCLIP7.4□□□□□ -1.221e-6■■■■□ 19.3
TGFBR3-202ENST00000370399 LGR5O75473 907 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 CRCPO75575 148 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 EDN1P05305 212 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 SETSIPP0DME0 302 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 SERPINB6P35237 376 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 LHX1P48742 406 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 TAPT1Q6NXT6 567 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 SDCCAG8Q86SQ7 713 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 GIMAP7Q8NHV1 300 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 GABPB2Q8TAK5 448 aaPredicted RBP7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 CCDC68Q9H2F9 335 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 SP110Q9HB58 689 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 PCMTD2Q9NV79 361 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 PCYOX1Q9UHG3 505 aa7.4□□□□□ -1.22
TGFBR3-202ENST00000370399 FAM47DPA6NHR8 397 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 DNALI1O14645 258 aaPredicted RBP7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 CYP1A1P04798 512 aaPredicted RBP7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 DNAJB2P25686 324 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 AXLP30530 894 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 ELK3P41970 407 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 ZNF143P52747 638 aaPredicted RBP7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 ATXN1P54253 815 aaKnown RBP7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 EPHB1P54762 984 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 CCL23P55773 120 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 POU5F1BQ06416 359 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 PDK1Q15118 436 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 E2F5Q15329 346 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 KCNA10Q16322 511 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 CTXN3Q4LDR2 81 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 FAM171A1Q5VUB5 890 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 CES3Q6UWW8 571 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 NT5DC4Q86YG4 428 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 LRRC34Q8IZ02 419 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 MYCBPAPQ8TBZ2 947 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 STRA6Q9BX79 667 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 LRRC19Q9H756 370 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 NINJ2Q9NZG7 142 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 PSMC3IPQ9P2W1 217 aaPredicted RBP7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 PADI3Q9ULW8 664 aa7.4□□□□□ -1.23
TGFBR3-202ENST00000370399 UTRNP46939 3433 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 ARHGAP42A6NI28 874 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 LIASO43766 372 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 CNMDO75829 334 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 ALDH1A1P00352 501 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 IQCF3P0C7M6 154 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 IRF1P10914 325 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 ASPAP45381 313 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 AARSP49588 968 aaKnown RBP eCLIP7.39□□□□□ -1.238e-6■■■■■ 52.4
TGFBR3-202ENST00000370399 SESN3P58005 492 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 COPS2P61201 443 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 CRADDP78560 199 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 EFEMP1Q12805 493 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 PDK2Q15119 407 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 KDM7AQ6ZMT4 941 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 TFAP2DQ7Z6R9 452 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 UNC45BQ8IWX7 931 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 BBS5Q8N3I7 341 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 SLC25A41Q8N5S1 370 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 PDCD7Q8N8D1 485 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 GPR152Q8TDT2 470 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 ZNF669Q96BR6 464 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 DDX27Q96GQ7 796 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 C16orf70Q9BSU1 422 aa7.39□□□□□ -1.23
TGFBR3-202ENST00000370399 PCDH9Q9HC56 1237 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms