RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 FBXO47Q5MNV8 452 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 TIGD7Q6NT04 549 aaPredicted RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 RBM23Q86U06 439 aaKnown RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 PARP9Q8IXQ6 854 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 SYTL5Q8TDW5 730 aaPredicted RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 RANBP17Q9H2T7 1088 aaKnown RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 CISHQ9NSE2 258 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 GRID1Q9ULK0 1009 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 TMX2Q9Y320 296 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 WNT10BO00744 389 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 TPST1O60507 370 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 AGTP01019 485 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 TPH1P17752 444 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 GEMIN4P57678 1058 aaKnown RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 USP13Q92995 863 aaPredicted RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 FAM111AQ96PZ2 611 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 CGRRF1Q99675 332 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 TMEM121Q9BTD3 319 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 PACSIN1Q9BY11 444 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 LNPEPQ9UIQ6 1025 aa8.83□□□□□ -1
ABCA4-201ENST00000370225 EIF3LQ9Y262 564 aaKnown RBP8.83□□□□□ -1
ABCA4-201ENST00000370225 TMEM120BA0PK00 339 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 DSG3P32926 999 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 ACVR2BQ13705 512 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 GIT2Q14161 759 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 POU6F1Q14863 301 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 AGAP9Q5VTM2 703 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 CACHD1Q5VU97 1274 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 KHDRBS2Q5VWX1 349 aaKnown RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 METTL7BQ6UX53 244 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 RAD9BQ6WBX8 426 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 NT5DC4Q86YG4 428 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 KIF2BQ8N4N8 673 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 CYP2W1Q8TAV3 490 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 IL25Q9H293 177 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 LZTS1Q9Y250 596 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 ERI2A8K979 691 aaKnown RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 PDZK1P1A8MUH7 402 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 IFRD1O00458 451 aaPredicted RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 CYP11B1P15538 503 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 FDFT1P37268 417 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 RFX5P48382 616 aaPredicted RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 NCKAP1LP55160 1127 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 PSMD12O00232 456 aaPredicted RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 MTSS1O43312 755 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 GSTM1P09488 218 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 MUTP22033 750 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 SREBF1P36956 1147 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 C11orf63Q6NUN7 778 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 FOXR1Q6PIV2 292 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 GMCL1P1Q8NEA9 526 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 SLC20A1Q8WUM9 679 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 PPP1R14AQ96A00 147 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 E2F7Q96AV8 911 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 FAR2Q96K12 515 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 ADGRE3Q9BY15 652 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 OLFML3Q9NRN5 406 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 PPIEQ9UNP9 301 aaKnown RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 PCDHB5Q9Y5E4 795 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 FAM47E-STBD1D6RA91 191 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 PARNO95453 639 aaKnown RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 TFE3P19532 575 aaPredicted RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 ALDH5A1P51649 535 aaPredicted RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 FBXO36Q8NEA4 188 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 TPCN2Q8NHX9 752 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 PNMA5Q96PV4 448 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 GID8Q9NWU2 228 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 FAM107AO95990 144 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 AKR1A1P14550 325 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 NUDT2P50583 147 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 PPP4CP60510 307 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 PSMC6P62333 389 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 ERVK-9P63128 1117 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 ERVK-24P63145 666 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 CYP24A1Q07973 514 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 BOP1Q14137 746 aaKnown RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 DENND1BQ6P3S1 775 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 RINLQ6ZS11 566 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 KCNB2Q92953 911 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 SYT15Q9BQS2 421 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 MIR1-1HGQ9H1L0 117 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 C17orf75Q9HAS0 396 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 ARL2BPQ9Y2Y0 163 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 SSU72P8A0A1W2PR75 194 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 SLC26A4O43511 780 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 CDH16O75309 829 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 PSEN2P49810 448 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 NDST1P52848 882 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 TBX4P57082 545 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 OTUD4Q01804 1114 aaKnown RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 CENPCQ03188 943 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 TFDP3Q5H9I0 405 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 GJC2Q5T442 439 aaPredicted RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 STRA8Q7Z7C7 330 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 MDM1Q8TC05 714 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 TAS1R2Q8TE23 839 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 GRAMD1AQ96CP6 724 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 MTFMTQ96DP5 389 aaKnown RBP8.82□□□□□ -1
ABCA4-201ENST00000370225 ZNF333Q96JL9 665 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms