RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 CCDC137Q6PK04 289 aaKnown RBP17.57■□□□□ 0.4
PHGDH-202ENST00000369409 IFT20Q8IY31 132 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 TMEM199Q8N511 208 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 TRIM51Q9BSJ1 452 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 UBXN6Q9BZV1 441 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 CWH43Q9H720 699 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 GDF3Q9NR23 364 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 CHST7Q9NS84 486 aa17.57■□□□□ 0.4
PHGDH-202ENST00000369409 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.57■□□□□ 0.4
PHGDH-202ENST00000369409 R3HDM2Q9Y2K5 976 aaKnown RBP17.57■□□□□ 0.4
PHGDH-202ENST00000369409 CD48P09326 243 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 KDELR1P24390 212 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 COILP38432 576 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-202ENST00000369409 SULT1E1P49888 294 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 ATXN1P54253 815 aaKnown RBP17.56■□□□□ 0.4
PHGDH-202ENST00000369409 WDR5P61964 334 aaKnown RBP17.56■□□□□ 0.4
PHGDH-202ENST00000369409 DHX34Q14147 1143 aaKnown RBP17.56■□□□□ 0.4
PHGDH-202ENST00000369409 MRPL58Q14197 206 aaKnown RBP17.56■□□□□ 0.4
PHGDH-202ENST00000369409 RTP2Q5QGT7 225 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 HNRNPLLQ8WVV9 542 aaKnown RBP17.56■□□□□ 0.4
PHGDH-202ENST00000369409 CASKIN2Q8WXE0 1202 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 TOP1MTQ969P6 601 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 TBCBQ99426 244 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 COL4A4P53420 1690 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-202ENST00000369409 ZNF638Q14966 1978 aaKnown RBP17.56■□□□□ 0.4
PHGDH-202ENST00000369409 YJEFN3A6XGL0 299 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 E7ENQ6 273 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 ZBED1O96006 694 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 TNFRSF8P28908 595 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 FNTAP49354 379 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 ALDH7A1P49419 539 aaKnown RBP17.56■□□□□ 0.4
PHGDH-202ENST00000369409 SNX1Q13596 522 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 DCAF6Q58WW2 860 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 CCNI2Q6ZMN8 369 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-202ENST00000369409 JAMLQ86YT9 394 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 KCTD6Q8NC69 237 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 CENPIQ92674 756 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-202ENST00000369409 PGLYRP2Q96PD5 576 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 SLC2A13Q96QE2 648 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 FAM118BQ9BPY3 351 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 DCLK3Q9C098 648 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 MCOLN1Q9GZU1 580 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 LRRC19Q9H756 370 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 POPDC2Q9HBU9 364 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 PNPLA8Q9NP80 782 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 GPATCH2LQ9NWQ4 482 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 PCYOX1Q9UHG3 505 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 PLXNA3P51805 1871 aa17.56■□□□□ 0.4
PHGDH-202ENST00000369409 OR6C75A6NL08 312 aa17.55■□□□□ 0.4
PHGDH-202ENST00000369409 TJP3O95049 919 aa17.55■□□□□ 0.4
PHGDH-202ENST00000369409 CAPN2P17655 700 aa17.55■□□□□ 0.4
PHGDH-202ENST00000369409 GRIK1P39086 918 aa17.55■□□□□ 0.4
PHGDH-202ENST00000369409 KCNJ1P48048 391 aa17.55■□□□□ 0.4
PHGDH-202ENST00000369409 CARSP49589 748 aaKnown RBP17.55■□□□□ 0.4
PHGDH-202ENST00000369409 PITX1P78337 314 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-202ENST00000369409 TRADDQ15628 312 aa17.55■□□□□ 0.4
PHGDH-202ENST00000369409 NFE2Q16621 373 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-202ENST00000369409 MAP9Q49MG5 647 aa17.55■□□□□ 0.4
PHGDH-202ENST00000369409 BEND6Q5SZJ8 279 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-202ENST00000369409 OTUD1Q5VV17 481 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-202ENST00000369409 BHLHA9Q7RTU4 235 aa17.55■□□□□ 0.4
PHGDH-202ENST00000369409 CCDC105Q8IYK2 499 aa17.55■□□□□ 0.4
PHGDH-202ENST00000369409 CMASQ8NFW8 434 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-202ENST00000369409 IFT81Q8WYA0 676 aa17.55■□□□□ 0.4
PHGDH-202ENST00000369409 NCAPGQ9BPX3 1015 aa17.55■□□□□ 0.4
PHGDH-202ENST00000369409 SNRNP25Q9BV90 132 aaKnown RBP17.55■□□□□ 0.4
PHGDH-202ENST00000369409 CALN1Q9BXU9 219 aa17.55■□□□□ 0.4
PHGDH-202ENST00000369409 CALCOCO1Q9P1Z2 691 aa17.55■□□□□ 0.4
PHGDH-202ENST00000369409 LTFP02788 710 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 CPB1P15086 417 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 EN2P19622 333 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-202ENST00000369409 NOS2P35228 1153 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 PTGIRP43119 386 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 CDH6P55285 790 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 ARPP19P56211 112 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 IFRD2Q12894 506 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-202ENST00000369409 SLC25A52Q3SY17 297 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 SPOUT1Q5T280 376 aaKnown RBP17.54■□□□□ 0.4
PHGDH-202ENST00000369409 SYPL2Q5VXT5 272 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 STRADAQ7RTN6 431 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 TAS1R1Q7RTX1 841 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 SCN4BQ8IWT1 228 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 RUNDC3BQ96NL0 473 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 TTPALQ9BTX7 342 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 RC3H2Q9HBD1 1191 aaKnown RBP17.54■□□□□ 0.4
PHGDH-202ENST00000369409 STAP1Q9ULZ2 295 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 NAALADL1Q9UQQ1 740 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 FAM187AA6NFU0 413 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 BHMG1C9JSJ3 638 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-202ENST00000369409 CAPN9O14815 690 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 EFCAB14O75071 495 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 FYNP06241 537 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 SLC5A3P53794 718 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 DYNLT1P63172 113 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 TAZQ16635 292 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 ZC3H12AQ5D1E8 599 aaKnown RBP17.54■□□□□ 0.4
PHGDH-202ENST00000369409 SCAMP5Q8TAC9 235 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 TEKT4Q8WW24 435 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 HAUS1Q96CS2 278 aa17.54■□□□□ 0.4
PHGDH-202ENST00000369409 ZNF689Q96CS4 500 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms