RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 PRKD2Q9BZL6 878 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 MRPL47Q9HD33 250 aaKnown RBP9.28□□□□□ -0.92
SNX27-201ENST00000368838 HCFC1R1Q9NWW0 138 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 IGSF9Q9P2J2 1179 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 SALL4Q9UJQ4 1053 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 STRIP2Q9ULQ0 834 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 TTC7AQ9ULT0 858 aaPredicted RBP9.28□□□□□ -0.92
SNX27-201ENST00000368838 PCDHB4Q9Y5E5 795 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 CAPN6Q9Y6Q1 641 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 NUMBLQ9Y6R0 609 aa9.28□□□□□ -0.92
SNX27-201ENST00000368838 SCN1AP35498 2009 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 DENND4CQ5VZ89 1909 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 A0A0U1RQJ8 604 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 TCRBV5S1A1TA0A578 114 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 PRR23AA6NEV1 266 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 MIF4GDA9UHW6 222 aaKnown RBP9.27□□□□□ -0.93
SNX27-201ENST00000368838 CALB1P05937 261 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 C8AP07357 584 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 TUBBP07437 444 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 DCNP07585 359 aaKnown RBP9.27□□□□□ -0.93
SNX27-201ENST00000368838 MMEP08473 750 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 PNMA6AP0CW24 399 aaPredicted RBP9.27□□□□□ -0.93
SNX27-201ENST00000368838 LAMP2P13473 410 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 KRT5P13647 590 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 WARSP23381 471 aaKnown RBP9.27□□□□□ -0.93
SNX27-201ENST00000368838 FSHRP23945 695 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 MAN1A1P33908 653 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 SLC1A1P43005 524 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 BRCC3P46736 316 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 GABRB2P47870 512 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 CLCNKBP51801 687 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 LILRA4P59901 499 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 TNNC1P63316 161 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 HTR4Q13639 388 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 ANGPT1Q15389 498 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 PKDCCQ504Y2 493 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 PPM1LQ5SGD2 360 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 LCLAT1Q6UWP7 414 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 RSPO2Q6UXX9 243 aaPredicted RBP9.27□□□□□ -0.93
SNX27-201ENST00000368838 MON1BQ7L1V2 547 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 CCDC105Q8IYK2 499 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 CEP112Q8N8E3 955 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 DTWD2Q8NBA8 298 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 SLC4A11Q8NBS3 891 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 ITFG1Q8TB96 612 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 SLC20A1Q8WUM9 679 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 ATRIPQ8WXE1 791 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 ING5Q8WYH8 240 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 KXD1Q9BQD3 176 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 TLR10Q9BXR5 811 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 FOXQ1Q9C009 403 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 IRF2BPLQ9H1B7 796 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 PLEKHA4Q9H4M7 779 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 TBC1D17Q9HA65 648 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.27□□□□□ -0.93
SNX27-201ENST00000368838 FNIP2Q9P278 1114 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 EPS15L1Q9UBC2 864 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 FBXW11Q9UKB1 542 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 SNX12Q9UMY4 172 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 CEP83Q9Y592 693 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 SAR1BQ9Y6B6 198 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 SCINQ9Y6U3 715 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 DUSP10Q9Y6W6 482 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 ZNF292O60281 2723 aa9.27□□□□□ -0.93
SNX27-201ENST00000368838 TSC2P49815 1807 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 GRID2IPA4D2P6 1211 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 EFCAB8A8MWE9 144 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 M0QZQ0 153 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 O00370 1275 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 SLU7O95391 586 aaKnown RBP9.26□□□□□ -0.93
SNX27-201ENST00000368838 KRT19P08727 400 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 HOXB1P14653 301 aaPredicted RBP9.26□□□□□ -0.93
SNX27-201ENST00000368838 TKTP29401 623 aaKnown RBP9.26□□□□□ -0.93
SNX27-201ENST00000368838 OR1D2P34982 312 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 USP8P40818 1118 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 NBL1P41271 181 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 NSFP46459 744 aaKnown RBP9.26□□□□□ -0.93
SNX27-201ENST00000368838 LHX1P48742 406 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 ARPP19P56211 112 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 SNX16P57768 344 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 SOX4Q06945 474 aaPredicted RBP9.26□□□□□ -0.93
SNX27-201ENST00000368838 ACAP1Q15027 740 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 UPP1Q16831 310 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 SOWAHAQ2M3V2 549 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 LIN9Q5TKA1 542 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 DCLRE1AQ6PJP8 1040 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 PARM1Q6UWI2 310 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 ZDHHC17Q8IUH5 632 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 MSANTD4Q8NCY6 345 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 C3orf58Q8NDZ4 430 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 MNS1Q8NEH6 495 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 SLC7A14Q8TBB6 771 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 SLC35G2Q8TBE7 412 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 PIK3R5Q8WYR1 880 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 FGF14Q92915 247 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 NKD2Q969F2 451 aaPredicted RBP9.26□□□□□ -0.93
SNX27-201ENST00000368838 HES6Q96HZ4 224 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 TNIP3Q96KP6 325 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 ZSWIM1Q9BR11 485 aa9.26□□□□□ -0.93
SNX27-201ENST00000368838 PACSIN1Q9BY11 444 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms