RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 TLR10Q9BXR5 811 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 LMAN2LQ9H0V9 348 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 GOLPH3Q9H4A6 298 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.9□□□□□ -0.34
TUBE1-202ENST00000368662 STAP1Q9ULZ2 295 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 SCML2Q9UQR0 700 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.9□□□□□ -0.34
TUBE1-202ENST00000368662 GBF1Q92538 1859 aa12.9□□□□□ -0.34
TUBE1-202ENST00000368662 CAPN9O14815 690 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 GRM6O15303 877 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 GRAP2O75791 330 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 LTFP02788 710 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 DNAJB1P25685 340 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 YWHAQP27348 245 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 NOS2P35228 1153 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 VEPH1Q14D04 833 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 TAF5Q15542 800 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 CCDC149Q6ZUS6 474 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 SLC2A13Q96QE2 648 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 DDX23Q9BUQ8 820 aaKnown RBP12.89□□□□□ -0.35
TUBE1-202ENST00000368662 NKX2-4Q9H2Z4 354 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 ABCC13Q9NSE7 274 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 HYOU1Q9Y4L1 999 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 YIPF1Q9Y548 306 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 SAR1BQ9Y6B6 198 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 YJEFN3A6XGL0 299 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 E7ENQ6 273 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 TGM5O43548 720 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 SEC24AO95486 1093 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 GLUD1P00367 558 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 CSH1P0DML2 217 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 CSH2P0DML3 217 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 TCP1P17987 556 aaKnown RBP12.89□□□□□ -0.35
TUBE1-202ENST00000368662 ATF6P18850 670 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 CTNNA1P35221 906 aaKnown RBP12.89□□□□□ -0.35
TUBE1-202ENST00000368662 PCK1P35558 622 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 GPR15P49685 360 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 PSEN1P49768 467 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 SMAD3P84022 425 aaKnown RBP12.89□□□□□ -0.35
TUBE1-202ENST00000368662 OGDHQ02218 1023 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 ZNF252P-AS1Q0IIN9 211 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 MON1AQ86VX9 555 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 CD101Q93033 1021 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 TMEM51Q9NW97 253 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 SNX12Q9UMY4 172 aa12.89□□□□□ -0.35
TUBE1-202ENST00000368662 CHD9Q3L8U1 2897 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 HIDE1A8MVS5 230 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 PSTPIP1O43586 416 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 CTNNA2P26232 953 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 IFRD2Q12894 506 aaPredicted RBP12.88□□□□□ -0.35
TUBE1-202ENST00000368662 HADHQ16836 314 aaKnown RBP12.88□□□□□ -0.35
TUBE1-202ENST00000368662 SLC25A52Q3SY17 297 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 CCDC14Q49A88 953 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 LRRC38Q5VT99 294 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 SDHAF4Q5VUM1 108 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 CC2D1AQ6P1N0 951 aaPredicted RBP12.88□□□□□ -0.35
TUBE1-202ENST00000368662 LILRA6Q6PI73 481 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 SPRED2Q7Z698 418 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 RHOT1Q8IXI2 618 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 DEFB106AQ8N104 65 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 OVCA2Q8WZ82 227 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 SLITRK1Q96PX8 696 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 TTLL2Q9BWV7 592 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 DPP7Q9UHL4 492 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 FBXW11Q9UKB1 542 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 PACSIN2Q9UNF0 486 aaPredicted RBP12.88□□□□□ -0.35
TUBE1-202ENST00000368662 INSL5Q9Y5Q6 135 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 SLC38A8A6NNN8 435 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 CES2O00748 559 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 NCK2O43639 380 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 SOAT2O75908 522 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 URI1O94763 535 aaPredicted RBP12.88□□□□□ -0.35
TUBE1-202ENST00000368662 NCAM1P13591 858 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 EPHB3P54753 998 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 YWHAGP61981 247 aaKnown RBP eCLIP12.88□□□□□ -0.35
TUBE1-202ENST00000368662 AMPD2Q01433 879 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 CAMK1Q14012 370 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 TAF12Q16514 161 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 DCAF6Q58WW2 860 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 BSPRYQ5W0U4 402 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 BTBD8Q5XKL5 378 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 STRADAQ7RTN6 431 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 BHLHA9Q7RTU4 235 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 POLNQ7Z5Q5 900 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 ITIH5Q86UX2 942 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 PDZD8Q8NEN9 1154 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 FBXO32Q969P5 355 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 NT5C3BQ969T7 300 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 CFAP57Q96MR6 1250 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 TLR8Q9NR97 1041 aaKnown RBP12.88□□□□□ -0.35
TUBE1-202ENST00000368662 USTQ9Y2C2 406 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 ASB3Q9Y575 518 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 PCDHA3Q9Y5H8 950 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 CHD7Q9P2D1 2997 aa12.88□□□□□ -0.35
TUBE1-202ENST00000368662 TNRC18O15417 2968 aaPredicted RBP12.87□□□□□ -0.35
TUBE1-202ENST00000368662 LRCH4O75427 683 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 SSR1P43307 286 aaKnown RBP12.87□□□□□ -0.35
TUBE1-202ENST00000368662 CLCN4P51793 760 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 TRNP1Q6NT89 227 aa12.87□□□□□ -0.35
TUBE1-202ENST00000368662 ELMSAN1Q6PJG2 1045 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms