RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 MST1RQ04912 1400 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 MAP3K13O43283 966 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 SYNCRIPO60506 623 aaKnown RBP13.32□□□□□ -0.28
PTPRK-207ENST00000368226 GUCA1CO95843 209 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 RARRES1P49788 294 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 NFIL3Q16649 462 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 PGS1Q32NB8 556 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 OTOAQ7RTW8 1153 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 FAM83AQ86UY5 434 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 MTSS1O43312 755 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 HOXA2O43364 376 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 FGFR1P11362 822 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 PSEN2P49810 448 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 SLC16A1P53985 500 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 EME1Q96AY2 570 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 TUBGCP3Q96CW5 907 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 DNAJC7Q99615 494 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 PIF1Q9H611 641 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 C10orf88Q9H8K7 445 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 SOAT2O75908 522 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 ACADMP11310 421 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 ALOX15P16050 662 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-207ENST00000368226 TARSP26639 723 aaKnown RBP13.32□□□□□ -0.28
PTPRK-207ENST00000368226 MAPK7Q13164 816 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 PLD1Q13393 1074 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 OTOP1Q7RTM1 612 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 STRA8Q7Z7C7 330 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 PALB2Q86YC2 1186 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.32□□□□□ -0.28
PTPRK-207ENST00000368226 PGK1P00558 417 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 AKR1A1P14550 325 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 HIST2H2ACQ16777 129 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-207ENST00000368226 HIST2H2AA3Q6FI13 130 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 GRAMD4Q6IC98 578 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 DENND1BQ6P3S1 775 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 REXO1L1PQ8IX06 675 aa13.32□□□□□ -0.28
PTPRK-207ENST00000368226 KIDINS220Q9ULH0 1771 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 ANKRD63C9JTQ0 380 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 ALDH1A2O94788 518 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 DDX5P17844 614 aaKnown RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 NUDT2P50583 147 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 CSHL1Q14406 222 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 STARD3Q14849 445 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 MRNIPQ6NTE8 343 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 CES3Q6UWW8 571 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 COLGALT1Q8NBJ5 622 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 PNMA5Q96PV4 448 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 A1CFQ9NQ94 594 aaKnown RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 KLC4Q9NSK0 619 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 GIMAP4Q9NUV9 329 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 PLAGL2Q9UPG8 496 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 CHUKO15111 745 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 EIF3HO15372 352 aaKnown RBP eCLIP13.31□□□□□ -0.282e-6■□□□□ 10.9
PTPRK-207ENST00000368226 ADCY3O60266 1144 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 NCALDP61601 193 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 PLOD1Q02809 727 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 SLC9A5Q14940 896 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 C16orf89Q6UX73 402 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 C10orf53Q8N6V4 93 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 SLC2A14Q8TDB8 520 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 YY1AP1Q9H869 796 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 SLC24A3Q9HC58 644 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 TLR8Q9NR97 1041 aaKnown RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 DSEQ9UL01 958 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 AAR2Q9Y312 384 aaKnown RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 HES2Q9Y543 173 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 MORC2Q9Y6X9 1032 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 A0A087X0B3 334 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 MANSC4A6NHS7 340 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 VPS26AO75436 327 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 HSPA1AP0DMV8 641 aaKnown RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 HSPA1BP0DMV9 641 aaKnown RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 IGFBP4P22692 258 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 NBPF20Q3BBV1 942 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 CXCL17Q6UXB2 119 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 TPGS1Q6ZTW0 290 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 UNC45BQ8IWX7 931 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 KCTD17Q8N5Z5 321 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 UCMAQ8WVF2 138 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 PPP1R2P1Q96PQ5 205 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 THUMPD3Q9BV44 507 aaKnown RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 ZNF556Q9HAH1 456 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 NWD1Q149M9 1564 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 ERI2A8K979 691 aaKnown RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 USP17L7P0C7H9 530 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 TFE3P19532 575 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 BDNFP23560 247 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 LSP1P33241 339 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 ALDH6A1Q02252 535 aaKnown RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 MTFR1Q15390 333 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 HERC6Q8IVU3 1022 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 SGSM3Q96HU1 749 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 LRRIQ1Q96JM4 1722 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 FAM198AQ9UFP1 575 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 ITGA11Q9UKX5 1188 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 MAP2P11137 1827 aaKnown RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 FOXP2O15409 715 aa13.31□□□□□ -0.28
PTPRK-207ENST00000368226 RNASEH1O60930 286 aaKnown RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 KPNA1P52294 538 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-207ENST00000368226 EVX2Q03828 476 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms