RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 ERO1BQ86YB8 467 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 CBWD2Q8IUF1 395 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 CROCCP3Q8IVE0 287 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 UNC5BQ8IZJ1 945 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 TMCO5AQ8N6Q1 288 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 OR6B3Q8NGW1 331 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 IRGQQ8WZA9 623 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 NAF1Q96HR8 494 aaKnown RBP7.56□□□□□ -1.2
VTA1-202ENST00000367630 CBWD1Q9BRT8 395 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 DDX4Q9NQI0 724 aaKnown RBP7.56□□□□□ -1.2
VTA1-202ENST00000367630 TBK1Q9UHD2 729 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 USP18Q9UMW8 372 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 ASS1P00966 412 aaKnown RBP7.56□□□□□ -1.2
VTA1-202ENST00000367630 PYGMP11217 842 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 CD58P19256 250 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 KRR1Q13601 381 aaKnown RBP7.56□□□□□ -1.2
VTA1-202ENST00000367630 ZBTB33Q86T24 672 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 SCUBE1Q8IWY4 988 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 EPS8L3Q8TE67 593 aaKnown RBP7.56□□□□□ -1.2
VTA1-202ENST00000367630 ZNF606Q8WXB4 792 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 RMDN1Q96DB5 314 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 TRMOQ9BU70 441 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 CISHQ9NSE2 258 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 ZDHHC18Q9NUE0 388 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 C6orf203Q9P0P8 240 aaPredicted RBP7.56□□□□□ -1.2
VTA1-202ENST00000367630 UMODL1Q5DID0 1318 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 IRS2Q9Y4H2 1338 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 EEF2KO00418 725 aaKnown RBP7.56□□□□□ -1.2
VTA1-202ENST00000367630 DNAJA2O60884 412 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 CCNB1P14635 433 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 UBXN2AP68543 259 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 HERC3Q15034 1050 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 FAM91A1Q658Y4 838 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 DPP9Q86TI2 863 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 RNF149Q8NC42 400 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 TAS1R2Q8TE23 839 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 PLK2Q9NYY3 685 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 SOX13Q9UN79 622 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 DDTLA6NHG4 134 aaPredicted RBP7.56□□□□□ -1.2
VTA1-202ENST00000367630 UBE2Q2LH0YL09 131 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 SERPINA6P08185 405 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 SERPINB10P48595 397 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 FRG1Q14331 258 aaKnown RBP7.56□□□□□ -1.2
VTA1-202ENST00000367630 AGAP9Q5VTM2 703 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 SPOPLQ6IQ16 392 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 ADGRD1Q6QNK2 874 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 STRADAQ7RTN6 431 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 UNC45BQ8IWX7 931 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 ZNF557Q8N988 423 aaPredicted RBP7.56□□□□□ -1.2
VTA1-202ENST00000367630 FBXO36Q8NEA4 188 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 CPA5Q8WXQ8 436 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 KIF12Q96FN5 646 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 DPP3Q9NY33 737 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 MCM8Q9UJA3 840 aa7.56□□□□□ -1.2
VTA1-202ENST00000367630 TMEM191CA6NGB0 347 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 BBIP1A8MTZ0 92 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 SRP72O76094 671 aaKnown RBP7.55□□□□□ -1.2
VTA1-202ENST00000367630 BAG2O95816 211 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 C6orf222P0C671 652 aaPredicted RBP7.55□□□□□ -1.2
VTA1-202ENST00000367630 RRM1P23921 792 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 PTPN9P43378 593 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 SULT1E1P49888 294 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 CBWD6Q4V339 395 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 CBWD3Q5JTY5 395 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 CBWD5Q5RIA9 395 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 MAGED4Q96JG8 741 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 NGRNQ9NPE2 291 aaKnown RBP7.55□□□□□ -1.2
VTA1-202ENST00000367630 CPSF3Q9UKF6 684 aaKnown RBP7.55□□□□□ -1.2
VTA1-202ENST00000367630 NENFQ9UMX5 172 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 PTCH2Q9Y6C5 1203 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 HGSO14964 777 aaPredicted RBP7.55□□□□□ -1.2
VTA1-202ENST00000367630 EDF1O60869 148 aaKnown RBP7.55□□□□□ -1.2
VTA1-202ENST00000367630 DAB1O75553 588 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 PYGLP06737 847 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 KDELR1P24390 212 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 SLC6A3Q01959 620 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 CATSPERGQ6ZRH7 1159 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 METTL3Q86U44 580 aaKnown RBP7.55□□□□□ -1.2
VTA1-202ENST00000367630 HEMGNQ9BXL5 484 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 EFCAB1Q9HAE3 211 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 OSGEPQ9NPF4 335 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 COMMD8Q9NX08 183 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 TUBGCP4Q9UGJ1 667 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 SMARCB1Q12824 385 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 PPIL2Q13356 520 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 GEN1Q17RS7 908 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 TMEM259Q4ZIN3 620 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 TSHZ1Q6ZSZ6 1077 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 TOP1MTQ969P6 601 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 BORCS6Q96GS4 357 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 OXNAD1Q96HP4 312 aaPredicted RBP7.55□□□□□ -1.2
VTA1-202ENST00000367630 FAM161BQ96MY7 647 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 FAM193BQ96PV7 902 aaPredicted RBP7.55□□□□□ -1.2
VTA1-202ENST00000367630 SLC9A7Q96T83 725 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 BAG5Q9UL15 447 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 AP4S1Q9Y587 144 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 FAM153BP0C7A2 387 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 GABRB2P47870 512 aa7.55□□□□□ -1.2
VTA1-202ENST00000367630 PURAQ00577 322 aaKnown RBP7.55□□□□□ -1.2
VTA1-202ENST00000367630 OTUD4Q01804 1114 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms