RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 LAMA5O15230 3695 aa12.16□□□□□ -0.46
MRPL55-212ENST00000366739 FRMD3A2A2Y4 597 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 ZNF233A6NK53 670 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 NDUFV2P19404 249 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 NTSR1P30989 418 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 SCAPQ12770 1279 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 RABEP1Q15276 862 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 SURF1Q15526 300 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 TRIP6Q15654 476 aaKnown RBP12.15□□□□□ -0.46
MRPL55-212ENST00000366739 HECTD3Q5T447 861 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 EGFLAMQ63HQ2 1017 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 LARP1BQ659C4 914 aaKnown RBP12.15□□□□□ -0.46
MRPL55-212ENST00000366739 TRAPPC11Q7Z392 1133 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 RABEPKQ7Z6M1 372 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 TMEM25Q86YD3 366 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 NUP93Q8N1F7 819 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 PNPLA1Q8N8W4 532 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 TRIML1Q8N9V2 468 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 TERB1Q8NA31 727 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 SCAMP5Q8TAC9 235 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 KCNV2Q8TDN2 545 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 OTUB2Q96DC9 234 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 CCSER2Q9H7U1 834 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 CD248Q9HCU0 757 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 CD93Q9NPY3 652 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 PANK4Q9NVE7 773 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 CHORDC1Q9UHD1 332 aaPredicted RBP12.15□□□□□ -0.46
MRPL55-212ENST00000366739 FBXO2Q9UK22 296 aaPredicted RBP12.15□□□□□ -0.46
MRPL55-212ENST00000366739 SMC3Q9UQE7 1217 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 SH3BP1Q9Y3L3 701 aa12.15□□□□□ -0.46
MRPL55-212ENST00000366739 KIAA0391O15091 583 aaKnown RBP12.14□□□□□ -0.47
MRPL55-212ENST00000366739 TACC1O75410 805 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 GJB3O75712 270 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 RTN3O95197 1032 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-212ENST00000366739 CST3P01034 146 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-212ENST00000366739 SYPP08247 313 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 IRF1P10914 325 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 HNRNPDQ14103 355 aaKnown RBP12.14□□□□□ -0.47
MRPL55-212ENST00000366739 WDR49Q8IV35 697 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 B3GALNT2Q8NCR0 500 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 PDZD8Q8NEN9 1154 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 OVCA2Q8WZ82 227 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 HPS3Q969F9 1004 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 KCNK16Q96T55 309 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 PANK2Q9BZ23 570 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 SLC6A17Q9H1V8 727 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 SPHK2Q9NRA0 654 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 HSPBP1Q9NZL4 362 aa12.14□□□□□ -0.47
MRPL55-212ENST00000366739 LOC400499M0QZD8 3231 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 A0A087X0B3 334 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 A0A1W2PQD8 194 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 A8MXQ7 604 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 ZNF217O75362 1048 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 FTH1P19P0C7X4 201 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 DLATP10515 647 aaKnown RBP12.13□□□□□ -0.47
MRPL55-212ENST00000366739 HOXD13P35453 343 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 TXLNAP40222 546 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 TNNC1P63316 161 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 PLEKHG6Q3KR16 790 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 WDR72Q3MJ13 1102 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 PREPLQ4J6C6 727 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-212ENST00000366739 SOWAHCQ53LP3 525 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-212ENST00000366739 GRAMD4Q6IC98 578 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 NUDT18Q6ZVK8 323 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 PDZD3Q86UT5 571 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 NAXDQ8IW45 347 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 CHPFQ8IZ52 775 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 RGL4Q8IZJ4 473 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 IPO4Q8TEX9 1081 aaKnown RBP12.13□□□□□ -0.47
MRPL55-212ENST00000366739 ADAMTS14Q8WXS8 1223 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 TRIM9Q9C026 710 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 DNAJC17Q9NVM6 304 aaKnown RBP12.13□□□□□ -0.47
MRPL55-212ENST00000366739 GMIPQ9P107 970 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 STARD13Q9Y3M8 1113 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 SRPRBQ9Y5M8 271 aaKnown RBP12.13□□□□□ -0.47
MRPL55-212ENST00000366739 RAD54BQ9Y620 910 aa12.13□□□□□ -0.47
MRPL55-212ENST00000366739 MYO18AQ92614 2054 aaKnown RBP12.13□□□□□ -0.47
MRPL55-212ENST00000366739 ADAMTS20P59510 1910 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 PRRT4C9JH25 899 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 NEDD8-MDP1E9PL57 170 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 ZBTB24O43167 697 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-212ENST00000366739 TNNI1P19237 187 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 MAOBP27338 520 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 STAT6P42226 847 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 PGFP49763 221 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 SLC5A3P53794 718 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 GRIK2Q13002 908 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 SLC14A1Q13336 389 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 SNRNP35Q16560 246 aaKnown RBP12.12□□□□□ -0.47
MRPL55-212ENST00000366739 COL28A1Q2UY09 1125 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 C8orf34Q49A92 452 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 SNX30Q5VWJ9 437 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 CCNI2Q6ZMN8 369 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-212ENST00000366739 CCDC73Q6ZRK6 1079 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 TOGARAM2Q6ZUX3 1019 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 PAQR9Q6ZVX9 377 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 FAM35AQ86V20 835 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 CCDC65Q8IXS2 484 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 RDH13Q8NBN7 331 aa12.12□□□□□ -0.47
MRPL55-212ENST00000366739 SPRYD3Q8NCJ5 442 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms