RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 RPL10AP62906 217 aaKnown RBP9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 GUCY1B3Q02153 619 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 SEMG2Q02383 582 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 ST3GAL1Q11201 340 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 INTS6LQ5JSJ4 861 aaKnown RBP9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 KCNT1Q5JUK3 1230 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 C10orf76Q5T2E6 689 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 FMNL3Q8IVF7 1028 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 SCN4BQ8IWT1 228 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 GALNT15Q8N3T1 639 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 IGSF22Q8N9C0 903 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 CXorf38Q8TB03 319 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 SNX29Q8TEQ0 813 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 ZDHHC5Q9C0B5 715 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 CLMPQ9H6B4 373 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 ABCB6Q9NP58 842 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 TMEM30AQ9NV96 361 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 DPP3Q9NY33 737 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 LRWD1Q9UFC0 647 aa9.09□□□□□ -0.95
HMGB1P39-201ENST00000366304 MYOFQ9NZM1 2061 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 KNL1Q8NG31 2342 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 A0A1B0GTW7 788 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 A0A1B0GVT2 93 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 PRRT4C9JH25 899 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 CBX4O00257 560 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 XPOTO43592 962 aaKnown RBP9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 OAS1P00973 400 aaKnown RBP9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 PIGRP01833 764 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 HLA-EP13747 358 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 PAX3P23760 479 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 NTSR1P30989 418 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 NCKAP1LP55160 1127 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 TSPY1Q01534 308 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 NFE2Q16621 373 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 CFAP221Q4G0U5 840 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 ARSHQ5FYA8 562 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 HAUS3Q68CZ6 603 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 LAYNQ6UX15 382 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 CRELD2Q6UXH1 353 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 TMEM25Q86YD3 366 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 FAM181AQ8N9Y4 354 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 TERB1Q8NA31 727 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 NSUN7Q8NE18 718 aaKnown RBP9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 ZSWIM2Q8NEG5 633 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 BICD1Q96G01 975 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 TOE1Q96GM8 510 aaKnown RBP9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 CDC6Q99741 560 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 GABRG3Q99928 467 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 ACBD6Q9BR61 282 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 TM6SF1Q9BZW5 370 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 MIR1-1HGQ9H1L0 117 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 C17orf75Q9HAS0 396 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 BRMS1Q9HCU9 246 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 DDX43Q9NXZ2 648 aaKnown RBP9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 SUSD2Q9UGT4 822 aa9.08□□□□□ -0.96
HMGB1P39-201ENST00000366304 FLRT2O43155 660 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 HOXC11O43248 304 aaPredicted RBP9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 TNFSF14O43557 240 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 TRAK2O60296 914 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 ZNF217O75362 1048 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 ADH1CP00326 375 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 NCAM1P13591 858 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 GNSP15586 552 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 SLC19A1P41440 591 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 MATKP42679 507 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 CSNK1EP49674 416 aaKnown RBP9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 LIG4P49917 911 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 CACNA2D1P54289 1103 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 TLE3Q04726 772 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 KIF19Q2TAC6 998 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 WDR45BQ5MNZ6 344 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 SYCP2LQ5T4T6 812 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 FAM171BQ6P995 826 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 GPR155Q7Z3F1 870 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 BBS7Q8IWZ6 715 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 KCNN1Q92952 543 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 TSPAN18Q96SJ8 248 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 FIZ1Q96SL8 496 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 MSTO1Q9BUK6 570 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 GPR174Q9BXC1 333 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 MKRN2Q9H000 416 aaKnown RBP9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 CRTAC1Q9NQ79 661 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 WSB2Q9NYS7 404 aaPredicted RBP9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 DACH1Q9UI36 760 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 DNM3Q9UQ16 869 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 DERAQ9Y315 318 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 STARD13Q9Y3M8 1113 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 NME7Q9Y5B8 376 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 PCDHGB2Q9Y5G2 931 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 SNX11Q9Y5W9 270 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 MYO18AQ92614 2054 aaKnown RBP9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 COL6A6A6NMZ7 2263 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 CABIN1Q9Y6J0 2220 aa9.07□□□□□ -0.96
HMGB1P39-201ENST00000366304 TEX51A0A1B0GUA7 166 aa9.06□□□□□ -0.96
HMGB1P39-201ENST00000366304 GABRDO14764 452 aa9.06□□□□□ -0.96
HMGB1P39-201ENST00000366304 HNRNPDLO14979 420 aaKnown RBP9.06□□□□□ -0.96
HMGB1P39-201ENST00000366304 BCAT2O15382 392 aaPredicted RBP9.06□□□□□ -0.96
HMGB1P39-201ENST00000366304 NDUFS2O75306 463 aa9.06□□□□□ -0.96
HMGB1P39-201ENST00000366304 CER1O95813 267 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms