RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ANXA2P07355 339 aaKnown RBP5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 PRR35P0CG20 571 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 MYCLP12524 364 aaPredicted RBP5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 PRIM2P49643 509 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 SLC10A2Q12908 348 aaPredicted RBP5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 FHL3Q13643 280 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 DAG1Q14118 895 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 SUPT20HL1Q3ZLR7 823 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 PTCHD4Q6ZW05 846 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 USP49Q70CQ1 688 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 YTHDF3Q7Z739 585 aaKnown RBP5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 CCAR1Q8IX12 1150 aaKnown RBP5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 C8orf48Q96LL4 319 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 ASB2Q96Q27 587 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 SARGQ9BW04 601 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 SLC29A3Q9BZD2 475 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 UNKQ9C0B0 810 aaKnown RBP5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 PNPLA8Q9NP80 782 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 PDGFCQ9NRA1 345 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 TFCP2L1Q9NZI6 479 aa5.44□□□□□ -1.54
RNU4-28P-201ENST00000364739 A0A087WZ62 844 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 AQP7P3A6NL99 342 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 EPHB2P29323 1055 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 MCM5P33992 734 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 MTHFD1LQ6UB35 978 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 KSR2Q6VAB6 950 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 CATSPERGQ6ZRH7 1159 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 RAB11FIP4Q86YS3 637 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 CCDC33Q8N5R6 958 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 ATP11CQ8NB49 1132 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 SMCR8Q8TEV9 937 aaPredicted RBP5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 NAA15Q9BXJ9 866 aaKnown RBP5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 FLRT1Q9NZU1 646 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 RNF7Q9UBF6 113 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 DNAJB11Q9UBS4 358 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 SLC27A6Q9Y2P4 619 aa5.43□□□□□ -1.54
RNU4-28P-201ENST00000364739 POC1B-GALNT4F8VUJ3 575 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 PMM2O15305 246 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 CA12O43570 354 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 GCATO75600 419 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 CYP2A6P11509 494 aaPredicted RBP5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 RPL17P18621 184 aaKnown RBP5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 ATICP31939 592 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 SAFBQ15424 915 aaKnown RBP eCLIP5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 FAM187BQ17R55 369 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 MTX3Q5HYI7 312 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 ZNF626Q68DY1 528 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 SLC18B1Q6NT16 456 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 SLC2A7Q6PXP3 512 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 SFTPA1Q8IWL2 248 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 SDR16C5Q8N3Y7 309 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 GALNT4Q8N4A0 578 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 IPCEF1Q8WWN9 437 aaPredicted RBP5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 IQCDQ96DY2 449 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 PRR11Q96HE9 360 aaPredicted RBP5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 NAF1Q96HR8 494 aaKnown RBP5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 CCDC17Q96LX7 622 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 NKX1-2Q9UD57 310 aaPredicted RBP5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 VPS51Q9UID3 782 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 CAPN11Q9UMQ6 739 aa5.42□□□□□ -1.54
RNU4-28P-201ENST00000364739 H7C1Q1 480 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 PPP6CO00743 305 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 ADAMTS3O15072 1205 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 SNX2O60749 519 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 INMTO95050 263 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 MT-CO3P00414 261 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 APEHP13798 732 aaKnown RBP5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 KELP23276 732 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 ARHGAP25P42331 645 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 CASP5P51878 434 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 RNF152Q8N8N0 203 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 C8orf58Q8NAV2 365 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 MAFAQ8NHW3 353 aaPredicted RBP5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 PARD3BQ8TEW8 1205 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 ZNF778Q96MU6 729 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 FAM83DQ9H4H8 585 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 KLHL13Q9P2N7 655 aa5.41□□□□□ -1.54
RNU4-28P-201ENST00000364739 SMIM35A0A1B0GVV1 85 aa5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 THAP12O43422 761 aa5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 TSHRP16473 764 aa5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 FGFR2P21802 821 aa5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 SFPQP23246 707 aaKnown RBP eCLIP5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 STT3AP46977 705 aa5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 EZH2Q15910 746 aaKnown RBP5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 GRHL2Q6ISB3 625 aa5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 CRTC1Q6UUV9 634 aa5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 CNGA4Q8IV77 575 aa5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 FSTL5Q8N475 847 aaPredicted RBP5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 ADAMTS18Q8TE60 1221 aa5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 EFHD1Q9BUP0 239 aa5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 SELENOOQ9BVL4 669 aa5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 SLC25A32Q9H2D1 315 aa5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 USP29Q9HBJ7 922 aa5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 HEYLQ9NQ87 328 aaPredicted RBP5.4□□□□□ -1.54
RNU4-28P-201ENST00000364739 KCNU1A8MYU2 1149 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 KIF3BO15066 747 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 NCK2O43639 380 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 TUBB4AP04350 444 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 CDK4P11802 303 aa5.39□□□□□ -1.55
RNU4-28P-201ENST00000364739 TRIM27P14373 513 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms