RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 BLMHQ13867 455 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 SF3B3Q15393 1217 aaKnown RBP2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 CYP1B1Q16678 543 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 LY6KQ17RY6 165 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 CERCAMQ5T4B2 595 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 PAPD7Q5XG87 772 aaKnown RBP2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 ICE2Q659A1 982 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 SFRP4Q6FHJ7 346 aaPredicted RBP2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 MRNIPQ6NTE8 343 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 PGBD2Q6P3X8 592 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 FOXR2Q6PJQ5 311 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 Q6YL49 198 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 MYLK4Q86YV6 388 aaPredicted RBP2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 METTL25Q8N6Q8 603 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 MBD3L2Q8NHZ7 208 aaPredicted RBP2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 OTUD7AQ8TE49 926 aaPredicted RBP2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 TMEM171Q8WVE6 324 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 LINC00476Q8WZB0 136 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 NELL1Q92832 810 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 PPP2R3CQ969Q6 453 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 RSPRY1Q96DX4 576 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 RNF31Q96EP0 1072 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 GBA2Q9HCG7 927 aaPredicted RBP2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 RXFP3Q9NSD7 469 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 KCTD5Q9NXV2 234 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 LPAR3Q9UBY5 353 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 PGAP2Q9UHJ9 254 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 SERTAD3Q9UJW9 196 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 HDAC9Q9UKV0 1011 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 CA14Q9ULX7 337 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 HPSEQ9Y251 543 aa2.85□□□□□ -1.95
RNU4-56P-201ENST00000364700 F5H697 171 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 TRIM38O00635 465 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 PIP5K1BO14986 540 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 ASNA1O43681 348 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 TRIAP1O43715 76 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 SRGAP2O75044 1071 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 VNN1O95497 513 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 GLP2RO95838 553 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 HLA-DOAP06340 250 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 JUPP14923 745 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 NTSR1P30989 418 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 LIPAP38571 399 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 MPLP40238 635 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 ITGA8P53708 1063 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 KRTAP10-9P60411 292 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 NSUN2Q08J23 767 aaKnown RBP eCLIP2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 CCNIQ14094 377 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 E2F2Q14209 437 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 CLCA4Q14CN2 919 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 ACOX1Q15067 660 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 PTPRRQ15256 657 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 TXNRD1Q16881 649 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 CCDC38Q502W7 563 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 PRR16Q569H4 304 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 FAXCQ5TGI0 409 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 ANO1Q5XXA6 986 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 FAM90A2PQ658T7 463 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 SLC9A4Q6AI14 798 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 RD3Q7Z3Z2 195 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 MYCT1Q8N699 235 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 SUPT20HQ8NEM7 779 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 MYRIPQ8NFW9 859 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 RSC1A1Q92681 617 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 MUL1Q969V5 352 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 KAZALD1Q96I82 304 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 ZBTB45Q96K62 511 aaPredicted RBP2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 COQ10AQ96MF6 247 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 HAPLN3Q96S86 360 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 PAAF1Q9BRP4 392 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 C17orf80Q9BSJ5 609 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 THAP7Q9BT49 309 aaPredicted RBP2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 VN1R3Q9BXE9 311 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 ACTRT3Q9BYD9 372 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 SERHL2Q9H4I8 314 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 MLXIPQ9HAP2 919 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 PRDM8Q9NQV8 689 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 DACT1Q9NYF0 836 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 DKK3Q9UBP4 350 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 DNAJB11Q9UBS4 358 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 SRP68Q9UHB9 627 aaKnown RBP2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 GJD2Q9UKL4 321 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 MTO1Q9Y2Z2 717 aaKnown RBP2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 DGKBQ9Y6T7 804 aa2.84□□□□□ -1.95
RNU4-56P-201ENST00000364700 SALL3Q9BXA9 1300 aa2.84□□□□□ -1.96
RNU4-56P-201ENST00000364700 TRGV11A0A075B6L2 103 aa2.83□□□□□ -1.96
RNU4-56P-201ENST00000364700 M0QZQ0 153 aa2.83□□□□□ -1.96
RNU4-56P-201ENST00000364700 M0R3H8 397 aa2.83□□□□□ -1.96
RNU4-56P-201ENST00000364700 TAF5LO75529 589 aa2.83□□□□□ -1.96
RNU4-56P-201ENST00000364700 ANXA6P08133 673 aa2.83□□□□□ -1.96
RNU4-56P-201ENST00000364700 IL6RP08887 468 aaPredicted RBP2.83□□□□□ -1.96
RNU4-56P-201ENST00000364700 KLRK1P26718 216 aa2.83□□□□□ -1.96
RNU4-56P-201ENST00000364700 MCM5P33992 734 aa2.83□□□□□ -1.96
RNU4-56P-201ENST00000364700 AVPR1BP47901 424 aa2.83□□□□□ -1.96
RNU4-56P-201ENST00000364700 RENBPP51606 427 aa2.83□□□□□ -1.96
RNU4-56P-201ENST00000364700 GUCY1B3Q02153 619 aa2.83□□□□□ -1.96
RNU4-56P-201ENST00000364700 KRT17Q04695 432 aa2.83□□□□□ -1.96
RNU4-56P-201ENST00000364700 ITIH3Q06033 890 aa2.83□□□□□ -1.96
RNU4-56P-201ENST00000364700 FOXI1Q12951 378 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms