RNA–Protein interactions for RNA: ENST00000364587.1

SNORA55-201, Transcript of small nucleolar RNA, H/ACA box 55, humanhuman

BASIC

Gene SNORA55, Length 135 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA55-201ENST00000364587 SCFD1Q8WVM8 642 aa9.45□□□□□ -0.9
SNORA55-201ENST00000364587 EXTL1Q92935 676 aa9.45□□□□□ -0.9
SNORA55-201ENST00000364587 SIPA1Q96FS4 1042 aa9.45□□□□□ -0.9
SNORA55-201ENST00000364587 ZBTB45Q96K62 511 aaPredicted RBP9.45□□□□□ -0.9
SNORA55-201ENST00000364587 ELF4Q99607 663 aaPredicted RBP9.45□□□□□ -0.9
SNORA55-201ENST00000364587 MKRN2Q9H000 416 aaKnown RBP9.45□□□□□ -0.9
SNORA55-201ENST00000364587 TMEM134Q9H6X4 195 aa9.45□□□□□ -0.9
SNORA55-201ENST00000364587 POLR1BQ9H9Y6 1135 aa9.45□□□□□ -0.9
SNORA55-201ENST00000364587 POLD4Q9HCU8 107 aa9.45□□□□□ -0.9
SNORA55-201ENST00000364587 TMLHEQ9NVH6 421 aa9.45□□□□□ -0.9
SNORA55-201ENST00000364587 SMPD4Q9NXE4 827 aa9.45□□□□□ -0.9
SNORA55-201ENST00000364587 CFAP97Q9P2B7 532 aa9.45□□□□□ -0.9
SNORA55-201ENST00000364587 CPQQ9Y646 472 aa9.45□□□□□ -0.9
SNORA55-201ENST00000364587 ANAPC1Q9H1A4 1944 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 TTC26A0AVF1 554 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 CCDC169A6NNP5 214 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 CYB561D2O14569 222 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 HOXC11O43248 304 aaPredicted RBP9.44□□□□□ -0.9
SNORA55-201ENST00000364587 TRAK2O60296 914 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 PPFIA2O75334 1257 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 ITGB2P05107 769 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 FAM87AP0C7U9 286 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 CXCL8P10145 99 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 GSPT1P15170 499 aaKnown RBP9.44□□□□□ -0.9
SNORA55-201ENST00000364587 CYP2F1P24903 491 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 TSPY1Q01534 308 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 KRTAP21-3Q3LHN1 58 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 GRAMD4Q6IC98 578 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 USP53Q70EK8 1073 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 TMPRSS6Q8IU80 811 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 PRCCQ92733 491 aaPredicted RBP9.44□□□□□ -0.9
SNORA55-201ENST00000364587 KIFAP3Q92845 792 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 OTUB2Q96DC9 234 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 CCNL2Q96S94 520 aaPredicted RBP9.44□□□□□ -0.9
SNORA55-201ENST00000364587 RNF38Q9H0F5 515 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 ASCL3Q9NQ33 180 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 TRPM5Q9NZQ8 1165 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.44□□□□□ -0.9
SNORA55-201ENST00000364587 PHLPP2Q6ZVD8 1323 aa9.44□□□□□ -0.9
SNORA55-201ENST00000364587 ARHGEF35A5YM69 484 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 PRRT4C9JH25 899 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 IGLV3-19P01714 112 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 CLTAP09496 248 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 SPATA31C1P0DKV0 1188 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 IFNAR1P17181 557 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 CD27P26842 260 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 RBMS1P29558 406 aaKnown RBP9.43□□□□□ -0.9
SNORA55-201ENST00000364587 ZNF132P52740 706 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 ASIC1P78348 528 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 GRIN1Q05586 938 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 PPP2R3AQ06190 1150 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 TTC22Q5TAA0 569 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 SPATA1Q5VX52 437 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 WSCD1Q658N2 575 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 FAM124AQ86V42 546 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 DDX42Q86XP3 938 aaKnown RBP eCLIP9.43□□□□□ -0.9
SNORA55-201ENST00000364587 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.43□□□□□ -0.9
SNORA55-201ENST00000364587 SKA1Q96BD8 255 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 ACE2Q9BYF1 805 aaPredicted RBP9.43□□□□□ -0.9
SNORA55-201ENST00000364587 LSG1Q9H089 658 aaKnown RBP9.43□□□□□ -0.9
SNORA55-201ENST00000364587 SLC25A18Q9H1K4 315 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 C6orf106Q9H6K1 298 aaPredicted RBP9.43□□□□□ -0.9
SNORA55-201ENST00000364587 ABCB6Q9NP58 842 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 SPHK2Q9NRA0 654 aa9.43□□□□□ -0.9
SNORA55-201ENST00000364587 POLQO75417 2590 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 TLN1Q9Y490 2541 aaKnown RBP9.42□□□□□ -0.9
SNORA55-201ENST00000364587 NBASA2RRP1 2371 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 LACTBL1A8MY62 500 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 PIRO00625 290 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 VILLO15195 856 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 YKT6O15498 198 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 CLDN3O15551 220 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 EFSO43281 561 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 SYNCRIPO60506 623 aaKnown RBP9.42□□□□□ -0.9
SNORA55-201ENST00000364587 TOM1L1O75674 476 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 GJB6O95452 261 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 ACP1P24666 158 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 PEX3P56589 373 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 SKOR1P84550 965 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 NOLC1Q14978 699 aaKnown RBP eCLIP9.42□□□□□ -0.9not detected■■□□□ 14.4
SNORA55-201ENST00000364587 NCAPHQ15003 741 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 NPY5RQ15761 445 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 RNF20Q5VTR2 975 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 C9orf57Q5W0N0 161 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 TAS1R3Q7RTX0 852 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 CATSPER3Q86XQ3 398 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 TMEM25Q86YD3 366 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 SCN4BQ8IWT1 228 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 NSUN7Q8NE18 718 aaKnown RBP9.42□□□□□ -0.9
SNORA55-201ENST00000364587 LEO1Q8WVC0 666 aaPredicted RBP9.42□□□□□ -0.9
SNORA55-201ENST00000364587 BIRC7Q96CA5 298 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 DEPDC7Q96QD5 511 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 XPO6Q96QU8 1125 aaKnown RBP9.42□□□□□ -0.9
SNORA55-201ENST00000364587 TSPAN18Q96SJ8 248 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 PYM1Q9BRP8 204 aaKnown RBP9.42□□□□□ -0.9
SNORA55-201ENST00000364587 EPN3Q9H201 632 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 DNAJC17Q9NVM6 304 aaKnown RBP9.42□□□□□ -0.9
SNORA55-201ENST00000364587 WDR70Q9NW82 654 aa9.42□□□□□ -0.9
SNORA55-201ENST00000364587 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.42□□□□□ -0.9
SNORA55-201ENST00000364587 RBM19Q9Y4C8 960 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms