RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.19□□□□□ -0.3
VAMP1-201ENST00000361716 GLIS2Q9BZE0 524 aaPredicted RBP13.19□□□□□ -0.3
VAMP1-201ENST00000361716 SEMA6AQ9H2E6 1030 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 MAN1C1Q9NR34 630 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 ARHGEF4Q9NR80 690 aa13.19□□□□□ -0.3
VAMP1-201ENST00000361716 XPO7Q9UIA9 1087 aaKnown RBP13.19□□□□□ -0.3
VAMP1-201ENST00000361716 TM9SF1O15321 606 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 BUD23O43709 281 aaKnown RBP13.18□□□□□ -0.3
VAMP1-201ENST00000361716 WEE2P0C1S8 567 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 GZMAP12544 262 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 QARSP47897 775 aaKnown RBP13.18□□□□□ -0.3
VAMP1-201ENST00000361716 TBL3Q12788 808 aaKnown RBP13.18□□□□□ -0.3
VAMP1-201ENST00000361716 ANKDD1AQ495B1 522 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 ATG16L1Q676U5 607 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 CDHR3Q6ZTQ4 885 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 USP37Q86T82 979 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 DAW1Q8N136 415 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 BANPQ8N9N5 519 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 LZICQ8WZA0 190 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
VAMP1-201ENST00000361716 MRPL11Q9Y3B7 192 aaKnown RBP13.18□□□□□ -0.3
VAMP1-201ENST00000361716 NFKBIAP25963 317 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 HOXA7P31268 230 aaPredicted RBP13.18□□□□□ -0.3
VAMP1-201ENST00000361716 SLC5A2P31639 672 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 RXRGP48443 463 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 EML3Q32P44 896 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 ZC3H3Q8IXZ2 948 aaKnown RBP13.18□□□□□ -0.3
VAMP1-201ENST00000361716 PRICKLE1Q96MT3 831 aaPredicted RBP13.18□□□□□ -0.3
VAMP1-201ENST00000361716 IMPG2Q9BZV3 1241 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 SEL1LQ9UBV2 794 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 NOCTQ9UK39 431 aaKnown RBP13.18□□□□□ -0.3
VAMP1-201ENST00000361716 EXOC7Q9UPT5 735 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 DNAJC16Q9Y2G8 782 aa13.18□□□□□ -0.3
VAMP1-201ENST00000361716 F8VP50 259 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 ABHD2P08910 425 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 VARSP26640 1264 aaKnown RBP13.17□□□□□ -0.3
VAMP1-201ENST00000361716 ELK3P41970 407 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 PKNOX1P55347 436 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 STX3Q13277 289 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 PPP2R5DQ14738 602 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 PRKD1Q15139 912 aaPredicted RBP13.17□□□□□ -0.3
VAMP1-201ENST00000361716 CASC4Q6P4E1 433 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 RNF111Q6ZNA4 994 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 NDUFAF2Q8N183 169 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 ZSCAN18Q8TBC5 510 aaPredicted RBP13.17□□□□□ -0.3
VAMP1-201ENST00000361716 THAP11Q96EK4 314 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 PPP1R16BQ96T49 567 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 UBAP1Q9NZ09 502 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 COL24A1Q17RW2 1714 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 A0A088AWK7 358 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 TCRBV7S3A2A0A539 114 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 SPTLC1O15269 473 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 PSMD10O75832 226 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 P4HBP07237 508 aaKnown RBP13.17□□□□□ -0.3
VAMP1-201ENST00000361716 GTF2H1P32780 548 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 EIF2B2P49770 351 aaKnown RBP13.17□□□□□ -0.3
VAMP1-201ENST00000361716 VCPP55072 806 aaKnown RBP13.17□□□□□ -0.3
VAMP1-201ENST00000361716 PSMC1P62191 440 aaKnown RBP13.17□□□□□ -0.3
VAMP1-201ENST00000361716 DNAJC24Q6P3W2 148 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 FASTKD5Q7L8L6 764 aaKnown RBP13.17□□□□□ -0.3
VAMP1-201ENST00000361716 RFX6Q8HWS3 928 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 WDR75Q8IWA0 830 aaKnown RBP13.17□□□□□ -0.3
VAMP1-201ENST00000361716 FAM71DQ8N9W8 422 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 ACSS2Q9NR19 701 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 EURLQ9NYK6 297 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 CIDEBQ9UHD4 219 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 CLUHO75153 1309 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 CYP3A7-CYP3A51PA0A087WV96 503 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 E9PBE3 544 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 NEMP1O14524 444 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 DCXO43602 365 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 LIASO43766 372 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 KLHL41O60662 606 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 KCNA4P22459 653 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 CYP3A7P24462 503 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 RPL10AP62906 217 aaKnown RBP13.17□□□□□ -0.3
VAMP1-201ENST00000361716 OTUD4Q01804 1114 aaKnown RBP13.17□□□□□ -0.3
VAMP1-201ENST00000361716 ITGA9Q13797 1035 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 RARS2Q5T160 578 aaKnown RBP13.17□□□□□ -0.3
VAMP1-201ENST00000361716 MCOLN2Q8IZK6 566 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 TMEM143Q96AN5 459 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 PCDH18Q9HCL0 1135 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 NYAP2Q9P242 653 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 TMA7Q9Y2S6 64 aaKnown RBP13.17□□□□□ -0.3
VAMP1-201ENST00000361716 IVNS1ABPQ9Y6Y0 642 aa13.17□□□□□ -0.3
VAMP1-201ENST00000361716 KBTBD13C9JR72 458 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 ALOX15BO15296 676 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 FAM58BPP0C7Q3 252 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 RARRES1P49788 294 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 CDH15P55291 814 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 SLC15A2Q16348 729 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 AOC3Q16853 763 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 BMT2Q1RMZ1 405 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 TMEM53Q6P2H8 277 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 CLVS1Q8IUQ0 354 aaPredicted RBP13.16□□□□□ -0.3
VAMP1-201ENST00000361716 FAM71AQ8IYT1 594 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 NLGN1Q8N2Q7 840 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 CHURC1Q8WUH1 139 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 APOPT1Q96IL0 206 aa13.16□□□□□ -0.3
VAMP1-201ENST00000361716 PRMT6Q96LA8 375 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms