RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 SERPINB5P36952 375 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 CCDC142Q17RM4 750 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 UBXN6Q9BZV1 441 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 SLC27A5Q9Y2P5 690 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 ABCA9Q8IUA7 1624 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 USP31Q70CQ4 1352 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 TTLL9Q3SXZ7 439 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 XRRA1Q6P2D8 792 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 ZC3H15Q8WU90 426 aaKnown RBP20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 LNPEPQ9UIQ6 1025 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 AP4E1Q9UPM8 1137 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 HES2Q9Y543 173 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 FAM47E-STBD1D6RA91 191 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 DYRK3O43781 588 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 CCDC22O60826 627 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 MICAL2O94851 1124 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 PLPP4Q5VZY2 271 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 PLEKHM3Q6ZWE6 761 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 USP50Q70EL3 339 aaPredicted RBP20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 THTPAQ9BU02 230 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 MKL2Q9ULH7 1088 aa20.96■□□□□ 0.95
CDC42BPB-201ENST00000361246 MT-CO1P00395 513 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 INPP5AQ14642 412 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 XPO6Q96QU8 1125 aaKnown RBP20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 TRPC4Q9UBN4 977 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 HPS5Q9UPZ3 1129 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 GAS2O43903 313 aaKnown RBP20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 RFX5P48382 616 aaPredicted RBP20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 MTSS1LQ765P7 747 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 TRAPPC11Q7Z392 1133 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 PRPF39Q86UA1 669 aaKnown RBP20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 MEGF6O75095 1541 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 SOAT2O75908 522 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 RAD23BP54727 409 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 GIT2Q14161 759 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 MYO1HQ8N1T3 1032 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 NAT16Q8N8M0 369 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 REPS2Q8NFH8 660 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 FAR2Q96K12 515 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 TMEM121Q9BTD3 319 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 GSTM1P09488 218 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 PLOD1Q02809 727 aaPredicted RBP20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 MTFR1Q15390 333 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 TEDDM1Q5T9Z0 273 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 E4F1Q66K89 784 aaPredicted RBP20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 TMEM199Q8N511 208 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 EXO5Q9H790 373 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 NDE1Q9NXR1 346 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 CCNT2O60583 730 aaKnown RBP20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 STAMBPL1Q96FJ0 436 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 PPP2R3BQ9Y5P8 575 aa20.95■□□□□ 0.94
CDC42BPB-201ENST00000361246 KPNA6O60684 536 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 SDHAF4Q5VUM1 108 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 LONP2Q86WA8 852 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 TRPM4Q8TD43 1214 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 HELQQ8TDG4 1101 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 RXFP2Q8WXD0 754 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 PIK3R5Q8WYR1 880 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 GAD1Q99259 594 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 ZDHHC9Q9Y397 364 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 TRADDQ15628 312 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 SNAP47Q5SQN1 464 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 LINC00523Q86TU6 105 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 SLC20A1Q8WUM9 679 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 ACOX2Q99424 681 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 ECSITQ9BQ95 431 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 PACSIN1Q9BY11 444 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 MRPL17Q9NRX2 175 aaKnown RBP20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 FDPSP14324 419 aaKnown RBP20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 OVGP1Q12889 678 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 CCDC81Q6ZN84 652 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 MRFAP1Q9Y605 127 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 CEP170BQ9Y4F5 1589 aaPredicted RBP20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 LTFP02788 710 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 KRT20P35900 424 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 TUBP50607 506 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 PPP4CP60510 307 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 KANSL3Q9P2N6 904 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 XYLBO75191 536 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 AMPD2Q01433 879 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 CNTN1Q12860 1018 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 WWP1Q9H0M0 922 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 RAB23Q9ULC3 237 aa20.94■□□□□ 0.94
CDC42BPB-201ENST00000361246 IRF6O14896 467 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 FKTNO75072 461 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 MED21Q13503 144 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 CES3Q6UWW8 571 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 KRT78Q8N1N4 520 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 TUBGCP3Q96CW5 907 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 TRPV2Q9Y5S1 764 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 CDY2AQ9Y6F7 541 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 SREBF1P36956 1147 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 CENPPQ6IPU0 288 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 GMCL1P1Q8NEA9 526 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 TAS1R2Q8TE23 839 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 SOHLH2Q9NX45 425 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 PHF20L1A8MW92 1017 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 GOLGA8TH3BQL2 631 aa20.93■□□□□ 0.94
CDC42BPB-201ENST00000361246 TPST1O60507 370 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms