RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 TNIP3Q96KP6 325 aa18.42■□□□□ 0.54
COL9A1-203ENST00000360859 DUSP9Q99956 384 aaKnown RBP18.42■□□□□ 0.54
COL9A1-203ENST00000360859 SDCBP2Q9H190 292 aa18.42■□□□□ 0.54
COL9A1-203ENST00000360859 GMIPQ9P107 970 aa18.42■□□□□ 0.54
COL9A1-203ENST00000360859 EVLQ9UI08 416 aaPredicted RBP18.42■□□□□ 0.54
COL9A1-203ENST00000360859 MYOFQ9NZM1 2061 aa18.42■□□□□ 0.54
COL9A1-203ENST00000360859 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-203ENST00000360859 TCRBV21S2A2A0A5A6 115 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 FAM92AA1XBS5 289 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 TBC1D3BA6NDS4 549 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 LRRIQ3A6PVS8 624 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-203ENST00000360859 TULP3O75386 442 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 AP1G2O75843 785 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 CLSTN1O94985 981 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 C4BPAP04003 597 aaKnown RBP18.41■□□□□ 0.54
COL9A1-203ENST00000360859 PROS1P07225 676 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 CEACAM1P13688 526 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 CSRP1P21291 193 aaKnown RBP18.41■□□□□ 0.54
COL9A1-203ENST00000360859 AFMP43652 599 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 AP3M2P53677 418 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 CUL4BQ13620 913 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 TRIM61Q5EBN2 209 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 FOXD4L5Q5VV16 416 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-203ENST00000360859 BTBD8Q5XKL5 378 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 ACOT1Q86TX2 421 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 TMEM25Q86YD3 366 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 PGBD3Q8N328 593 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 GOLGA5Q8TBA6 731 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 FOXD4L4Q8WXT5 416 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-203ENST00000360859 WBP2Q969T9 261 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 SPHK2Q9NRA0 654 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 KRT82Q9NSB4 513 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 TMEM74BQ9NUR3 256 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 COMMD8Q9NX08 183 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 DEC1Q9P2X7 70 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 WASF3Q9UPY6 502 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 FRYQ5TBA9 3013 aa18.41■□□□□ 0.54
COL9A1-203ENST00000360859 CFAP47Q6ZTR5 3102 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 VNN1O95497 513 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 PGFP49763 221 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 LMAN2Q12907 356 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 FOXC1Q12948 553 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 BYSLQ13895 437 aaKnown RBP18.4■□□□□ 0.54
COL9A1-203ENST00000360859 ANO4Q32M45 955 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 UAP1L1Q3KQV9 507 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 SPDYCQ5MJ68 293 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 SYT12Q8IV01 421 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 GRAMD1CQ8IYS0 662 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 ZNF513Q8N8E2 541 aaPredicted RBP18.4■□□□□ 0.54
COL9A1-203ENST00000360859 ZMIZ2Q8NF64 920 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 KCNV2Q8TDN2 545 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 SMOQ99835 787 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 NACA2Q9H009 215 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 DMAC2Q9NW81 257 aa18.4■□□□□ 0.54
COL9A1-203ENST00000360859 BEST1O76090 585 aa18.39■□□□□ 0.53
COL9A1-203ENST00000360859 IRF1P10914 325 aa18.39■□□□□ 0.53
COL9A1-203ENST00000360859 CCDC130P13994 396 aa18.39■□□□□ 0.53
COL9A1-203ENST00000360859 ORC1Q13415 861 aa18.39■□□□□ 0.53
COL9A1-203ENST00000360859 FOXD4L6Q3SYB3 417 aaPredicted RBP18.39■□□□□ 0.53
COL9A1-203ENST00000360859 PREPLQ4J6C6 727 aaPredicted RBP18.39■□□□□ 0.53
COL9A1-203ENST00000360859 C10orf76Q5T2E6 689 aa18.39■□□□□ 0.53
COL9A1-203ENST00000360859 FOXD4L3Q6VB84 417 aaPredicted RBP18.39■□□□□ 0.53
COL9A1-203ENST00000360859 TRMT11Q7Z4G4 463 aaKnown RBP18.39■□□□□ 0.53
COL9A1-203ENST00000360859 TERB1Q8NA31 727 aa18.39■□□□□ 0.53
COL9A1-203ENST00000360859 NUSAP1Q9BXS6 441 aaKnown RBP18.39■□□□□ 0.53
COL9A1-203ENST00000360859 CSNK1G1Q9HCP0 422 aa18.39■□□□□ 0.53
COL9A1-203ENST00000360859 FAM13BQ9NYF5 915 aa18.39■□□□□ 0.53
COL9A1-203ENST00000360859 HCN2Q9UL51 889 aa18.39■□□□□ 0.53
COL9A1-203ENST00000360859 PCDHA7Q9UN72 937 aa18.39■□□□□ 0.53
COL9A1-203ENST00000360859 CEP295Q9C0D2 2601 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 TNRC6BQ9UPQ9 1833 aaKnown RBP18.38■□□□□ 0.53
COL9A1-203ENST00000360859 C1QTNF9BB2RNN3 333 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 TRIM24O15164 1050 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 GREM1O60565 184 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 TLR5O60602 858 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 C1QTNF9P0C862 333 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 P4HA1P13674 534 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 MAPK8P45983 427 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 ME1P48163 572 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 DLG4P78352 724 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 RESP18Q5W5W9 173 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 LYSMD4Q5XG99 296 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 SLC9A9Q8IVB4 645 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 CRYBG2Q8N1P7 616 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 DEFB124Q8NES8 71 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 SLC2A14Q8TDB8 520 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 HMGXB4Q9UGU5 601 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 PILRBQ9UKJ0 227 aa18.38■□□□□ 0.53
COL9A1-203ENST00000360859 KLRC4O43908 158 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 TBX18O95935 607 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 TOP3BO95985 862 aaKnown RBP18.37■□□□□ 0.53
COL9A1-203ENST00000360859 ENGP17813 658 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 GABRG2P18507 467 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 SPINK2P20155 84 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 ITPKAP23677 461 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 DPP6P42658 865 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 NDST1P52848 882 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 MAP3K7CLP57077 242 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 STK4Q13043 487 aa18.37■□□□□ 0.53
COL9A1-203ENST00000360859 SGSM1Q2NKQ1 1148 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms