RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 ELK3P41970 407 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 GCLCP48506 637 aaPredicted RBP27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 NRLP54845 237 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 CDC42EP1Q00587 391 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 KIZQ2M2Z5 673 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 ARHGAP17Q68EM7 881 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 C1orf228Q6PIY5 440 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 LVRNQ6Q4G3 990 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 PQLC3Q8N755 202 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 FAF2Q96CS3 445 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 SNTG2Q9NY99 539 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 NQO1P15559 274 aaKnown RBP27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 YARSP54577 528 aaKnown RBP27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 RIPK1Q13546 671 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 PCBP1Q15365 356 aaKnown RBP eCLIP27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 SCYL2Q6P3W7 929 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 TBC1D1Q86TI0 1168 aaPredicted RBP27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 OR6J1Q8NGC5 347 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 SPOCK2Q92563 424 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 KHSRPQ92945 711 aaKnown RBP eCLIP27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 SNRNP25Q9BV90 132 aaKnown RBP27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 GCOM2Q9BZD3 368 aaPredicted RBP27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 FAM49BQ9NUQ9 324 aa27.46■■□□□ 1.99
CUEDC1-201ENST00000360238 BCLAF3A2AJT9 711 aaKnown RBP27.45■■□□□ 1.99
CUEDC1-201ENST00000360238 UNCXA6NJT0 531 aa27.45■■□□□ 1.99
CUEDC1-201ENST00000360238 PPEF2O14830 753 aa27.45■■□□□ 1.99
CUEDC1-201ENST00000360238 PAPSS1O43252 624 aaPredicted RBP27.45■■□□□ 1.99
CUEDC1-201ENST00000360238 BCAR1P56945 870 aa27.45■■□□□ 1.99
CUEDC1-201ENST00000360238 TUBGCP4Q9UGJ1 667 aa27.45■■□□□ 1.99
CUEDC1-201ENST00000360238 NME7Q9Y5B8 376 aa27.45■■□□□ 1.99
CUEDC1-201ENST00000360238 USH1CQ9Y6N9 552 aa27.45■■□□□ 1.99
CUEDC1-201ENST00000360238 SRCAPQ6ZRS2 3230 aa27.45■■□□□ 1.98
CUEDC1-201ENST00000360238 IGDCC3Q8IVU1 814 aa27.45■■□□□ 1.98
CUEDC1-201ENST00000360238 CXCL16Q9H2A7 254 aa27.45■■□□□ 1.98
CUEDC1-201ENST00000360238 CD248Q9HCU0 757 aa27.45■■□□□ 1.98
CUEDC1-201ENST00000360238 KBTBD13C9JR72 458 aa27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 KCNN4O15554 427 aa27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 CCNB1P14635 433 aa27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 PTPN9P43378 593 aa27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 GTF2A1P52655 376 aaPredicted RBP27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 NOTUMQ6P988 496 aa27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 CATSPER4Q7RTX7 472 aa27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 BANPQ8N9N5 519 aa27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 PCDH19Q8TAB3 1148 aa27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 MAML3Q96JK9 1138 aa27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 PNPLA8Q9NP80 782 aa27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 RAB6BQ9NRW1 208 aa27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 GPATCH2LQ9NWQ4 482 aa27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 CNTN3Q9P232 1028 aa27.44■■□□□ 1.98
CUEDC1-201ENST00000360238 IQANK1A0A1B0GTG1 560 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 TCRBV9S1A1TA0A576 114 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 ATP6V1G2O95670 118 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 ZBED1O96006 694 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 SCNN1AP37088 669 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 MAGEA6P43360 314 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 GRB14Q14449 540 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 DPP9Q86TI2 863 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 FAM228AQ86W67 206 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 ANKLE1Q8NAG6 615 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 SLC44A1Q8WWI5 657 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 ADAM33Q9BZ11 813 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 ABHD16BQ9H3Z7 469 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 SLCO1B3Q9NPD5 702 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 BTBD19C9JJ37 291 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 HDAC4P56524 1084 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 MTM1Q13496 603 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 C4orf22Q6V702 233 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 SCUBE3Q8IX30 993 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 KLHL29Q96CT2 875 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 MS4A4AQ96JQ5 239 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 KLC2Q9H0B6 622 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 SETD4Q9NVD3 440 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 SCN4AP35499 1836 aa27.43■■□□□ 1.98
CUEDC1-201ENST00000360238 GPR32O75388 356 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 ALADP13716 330 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 SETDB1Q15047 1291 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 ASRGL1Q7L266 308 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 ARCQ7LC44 396 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 GPR142Q7Z601 462 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 ZNF75CPQ92670 426 aaPredicted RBP27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 EIF2AQ9BY44 585 aaKnown RBP27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 HEY1Q9Y5J3 304 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 IKBKGQ9Y6K9 419 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 ZNF236Q9UL36 1845 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 GABBR2O75899 941 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 SLC8A1P32418 973 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 KCNJ2P63252 427 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 ZNF200P98182 395 aaPredicted RBP27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 SEPT7Q16181 437 aaKnown RBP27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 CA9Q16790 459 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 C9orf57Q5W0N0 161 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 IQSEC1Q6DN90 963 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 ALKAL1Q6UXT8 129 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 OR6B3Q8NGW1 331 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 C11orf84Q9BUA3 381 aaPredicted RBP27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 CYLDQ9NQC7 956 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 ARHGEF3Q9NR81 526 aa27.42■■□□□ 1.98
CUEDC1-201ENST00000360238 IGF2BP3O00425 579 aaKnown RBP eCLIP27.41■■□□□ 1.98
CUEDC1-201ENST00000360238 ADRA1DP25100 572 aa27.41■■□□□ 1.98
CUEDC1-201ENST00000360238 RBL1P28749 1068 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms