RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 KLHL24Q6TFL4 600 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 IZUMO1Q8IYV9 350 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 FAM45AQ8TCE6 357 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 CERKQ8TCT0 537 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 FICDQ9BVA6 458 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 FANCEQ9HB96 536 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 STK39Q9UEW8 545 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 HPGDP15428 266 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 IL12RB1P42701 662 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 NEDD1Q8NHV4 660 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 UBP1Q9NZI7 540 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 RNF181Q9P0P0 153 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 MCM8Q9UJA3 840 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 ARHGAP31Q2M1Z3 1444 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 MAP3K13O43283 966 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 FAM58BPP0C7Q3 252 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 CASP4P49662 377 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 EXOSC10Q01780 885 aaKnown RBP16.53■□□□□ 0.24
COL18A1-203ENST00000359759 SEMA3FQ13275 785 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 TDRD10Q5VZ19 366 aaKnown RBP16.53■□□□□ 0.24
COL18A1-203ENST00000359759 DNAAF5Q86Y56 855 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 ZSCAN18Q8TBC5 510 aaPredicted RBP16.53■□□□□ 0.24
COL18A1-203ENST00000359759 MED8Q96G25 268 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 FAM84BQ96KN1 310 aaPredicted RBP16.53■□□□□ 0.24
COL18A1-203ENST00000359759 NIF3L1Q9GZT8 377 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 PABPC3Q9H361 631 aaKnown RBP16.53■□□□□ 0.24
COL18A1-203ENST00000359759 CDHR2Q9BYE9 1310 aa16.53■□□□□ 0.24
COL18A1-203ENST00000359759 ATG7O95352 703 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 YWHAQP27348 245 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 NT5C2P49902 561 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 C1DQ13901 141 aaKnown RBP16.52■□□□□ 0.24
COL18A1-203ENST00000359759 TTLL9Q3SXZ7 439 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 KCNV1Q6PIU1 500 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 NT5DC3Q86UY8 548 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 KIFC1Q9BW19 673 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 SEMA6AQ9H2E6 1030 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 DPP3Q9NY33 737 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 PCDHB7Q9Y5E2 793 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 ZNF521Q96K83 1311 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 P4HA2O15460 535 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 ERVK-24P63145 666 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 SMIM5Q71RC9 77 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 MYO1HQ8N1T3 1032 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 RGS18Q9NS28 235 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.52■□□□□ 0.24
COL18A1-203ENST00000359759 ERI2A8K979 691 aaKnown RBP16.52■□□□□ 0.24
COL18A1-203ENST00000359759 FGFR3P22607 806 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 HALP42357 657 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 ZNF177Q13360 481 aaPredicted RBP16.52■□□□□ 0.24
COL18A1-203ENST00000359759 ZFYVE1Q9HBF4 777 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 SENP2Q9HC62 589 aa16.52■□□□□ 0.24
COL18A1-203ENST00000359759 PPP1R3GB7ZBB8 358 aa16.52■□□□□ 0.23
COL18A1-203ENST00000359759 SLC2A4P14672 509 aa16.52■□□□□ 0.23
COL18A1-203ENST00000359759 PKN2Q16513 984 aaKnown RBP16.52■□□□□ 0.23
COL18A1-203ENST00000359759 MRNIPQ6NTE8 343 aa16.52■□□□□ 0.23
COL18A1-203ENST00000359759 COMMD8Q9NX08 183 aa16.52■□□□□ 0.23
COL18A1-203ENST00000359759 TUBGCP4Q9UGJ1 667 aa16.52■□□□□ 0.23
COL18A1-203ENST00000359759 RPS6KA4O75676 772 aa16.52■□□□□ 0.23
COL18A1-203ENST00000359759 ZNF543Q08ER8 600 aa16.52■□□□□ 0.23
COL18A1-203ENST00000359759 EZH2Q15910 746 aaKnown RBP16.52■□□□□ 0.23
COL18A1-203ENST00000359759 PTAR1Q7Z6K3 402 aaPredicted RBP16.52■□□□□ 0.23
COL18A1-203ENST00000359759 FAM120BQ96EK7 910 aaKnown RBP16.52■□□□□ 0.23
COL18A1-203ENST00000359759 ALDH8A1Q9H2A2 487 aaPredicted RBP16.52■□□□□ 0.23
COL18A1-203ENST00000359759 PLA2G6O60733 806 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL18A1-203ENST00000359759 DCP1BQ8IZD4 617 aaKnown RBP16.51■□□□□ 0.23
COL18A1-203ENST00000359759 PHF21BQ96EK2 531 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 RPRD1AQ96P16 312 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-203ENST00000359759 EPS8L2Q9H6S3 715 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 HS6ST1O60243 411 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 CDC25CP30307 473 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 C4orf22Q6V702 233 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 CLVS1Q8IUQ0 354 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-203ENST00000359759 ATP6V0D2Q8N8Y2 350 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 FAR2Q96K12 515 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 CDC42EP4Q9H3Q1 356 aaKnown RBP16.51■□□□□ 0.23
COL18A1-203ENST00000359759 RIBC2Q9H4K1 309 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 DCLRE1BQ9H816 532 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 MTMR4Q9NYA4 1195 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 MAPK1P28482 360 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 CCNG1P51959 295 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 CUL2Q13617 745 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 IER5Q5VY09 327 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 SAPCD2Q86UD0 394 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 PIH1D1Q9NWS0 290 aaKnown RBP16.51■□□□□ 0.23
COL18A1-203ENST00000359759 DYRK1BQ9Y463 629 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 EIF3DO15371 548 aaKnown RBP eCLIP16.51■□□□□ 0.234e-6■■□□□ 12.4
COL18A1-203ENST00000359759 TBC1D12O60347 775 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 SNUPNO95149 360 aaKnown RBP16.51■□□□□ 0.23
COL18A1-203ENST00000359759 GH1P01241 217 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 CLEC4GQ6UXB4 293 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 ENKURQ8TC29 256 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 IGDCC4Q8TDY8 1250 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 MOV10L1Q9BXT6 1211 aaKnown RBP16.51■□□□□ 0.23
COL18A1-203ENST00000359759 POLR1BQ9H9Y6 1135 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 NMRK1Q9NWW6 199 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 SDR42E2A6NKP2 422 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 LTFP02788 710 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 NOS3P29474 1203 aa16.51■□□□□ 0.23
COL18A1-203ENST00000359759 EN1Q05925 392 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms