RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 SLC27A3Q5K4L6 730 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 ZNF772Q68DY9 489 aaPredicted RBP11.32□□□□□ -0.6
RPE-202ENST00000359429 THNSL1Q8IYQ7 743 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 NLGN1Q8N2Q7 840 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 PYDC1Q8WXC3 89 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 PEBP4Q96S96 227 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 CPXM1Q96SM3 734 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 MMP19Q99542 508 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 OCEL1Q9H607 264 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 STK32BQ9NY57 414 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 MYH9P35579 1960 aaKnown RBP11.32□□□□□ -0.6
RPE-202ENST00000359429 I3L4J1 428 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 RAD17O75943 681 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 PSAPP07602 524 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 CSH1P0DML2 217 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 CSH2P0DML3 217 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 ETS2P15036 469 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 ACTR2P61160 394 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 TAP1Q03518 808 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 SLC5A9Q2M3M2 681 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 DARS2Q6PI48 645 aaKnown RBP11.32□□□□□ -0.6
RPE-202ENST00000359429 ABHD15Q6UXT9 468 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 NUDCD3Q8IVD9 361 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 CMASQ8NFW8 434 aaPredicted RBP11.32□□□□□ -0.6
RPE-202ENST00000359429 USP6NLQ92738 828 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 FAF2Q96CS3 445 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 SPATA16Q9BXB7 569 aa11.32□□□□□ -0.6
RPE-202ENST00000359429 HBS1LQ9Y450 684 aaKnown RBP11.32□□□□□ -0.6
RPE-202ENST00000359429 MCF2LO15068 1137 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 CIB2O75838 187 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 PIGRP01833 764 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 ASNSP08243 561 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 SNRPAP09012 282 aaKnown RBP11.31□□□□□ -0.6
RPE-202ENST00000359429 GRIA2P42262 883 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 PSMC1P62191 440 aaKnown RBP11.31□□□□□ -0.6
RPE-202ENST00000359429 AP2B1P63010 937 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 IRX4P78413 519 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 SFT2D3Q587I9 215 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 RALGPS1Q5JS13 557 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 RASIP1Q5U651 963 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 ANGEL2Q5VTE6 544 aaKnown RBP11.31□□□□□ -0.6
RPE-202ENST00000359429 TRMT10BQ6PF06 316 aaKnown RBP11.31□□□□□ -0.6
RPE-202ENST00000359429 ATG14Q6ZNE5 492 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 ZBTB33Q86T24 672 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 CAND1Q86VP6 1230 aaKnown RBP11.31□□□□□ -0.6
RPE-202ENST00000359429 DEPTORQ8TB45 409 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 RILPQ96NA2 401 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 ZNF518BQ9C0D4 1074 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 FAM192AQ9GZU8 254 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 WWP1Q9H0M0 922 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 POPDC2Q9HBU9 364 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 JPH1Q9HDC5 661 aaPredicted RBP11.31□□□□□ -0.6
RPE-202ENST00000359429 RAB6BQ9NRW1 208 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 PCDHGC3Q9UN70 934 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 WDR46O15213 610 aaKnown RBP11.31□□□□□ -0.6
RPE-202ENST00000359429 SNNO75324 88 aaPredicted RBP11.31□□□□□ -0.6
RPE-202ENST00000359429 ERBB2P04626 1255 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 SPATA31D3P0C874 917 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 RAP1GAPP47736 663 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 HADHQ16836 314 aaKnown RBP11.31□□□□□ -0.6
RPE-202ENST00000359429 LIN52Q52LA3 116 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 TMCO4Q5TGY1 634 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 LPCAT4Q643R3 524 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 SLFN12LQ6IEE8 588 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 SPATA31D4Q6ZUB0 917 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 POU5F2Q8N7G0 328 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 GPRASP2Q96D09 838 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 ZNF778Q96MU6 729 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 FRMD8P1Q9BZ68 369 aaPredicted RBP11.31□□□□□ -0.6
RPE-202ENST00000359429 UBE2OQ9C0C9 1292 aaKnown RBP11.31□□□□□ -0.6
RPE-202ENST00000359429 PORCNQ9H237 461 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 USP29Q9HBJ7 922 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 PGAP2Q9UHJ9 254 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 RGPD3A6NKT7 1758 aaPredicted RBP11.31□□□□□ -0.6
RPE-202ENST00000359429 RGPD4Q7Z3J3 1758 aa11.31□□□□□ -0.6
RPE-202ENST00000359429 SDR42E2A6NKP2 422 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 H0YCG3 227 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 ITM2AO43736 263 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 FAM189A1O60320 539 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 TBC1D12O60347 775 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 LYPLA1O75608 230 aaPredicted RBP11.3□□□□□ -0.6
RPE-202ENST00000359429 LDHAP00338 332 aaKnown RBP11.3□□□□□ -0.6
RPE-202ENST00000359429 CD19P15391 556 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 CDK7P50613 346 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 ROR1Q01973 937 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 SP2Q02086 613 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 MSLNQ13421 630 aaPredicted RBP11.3□□□□□ -0.6
RPE-202ENST00000359429 TUBB3Q13509 450 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 CUL3Q13618 768 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 LAMB3Q13751 1172 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 NOMO1Q15155 1222 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 MROH9Q5TGP6 573 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 C1orf228Q6PIY5 440 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 XYLT1Q86Y38 959 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 NIF3L1Q9GZT8 377 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 SMYD3Q9H7B4 428 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 PNPLA8Q9NP80 782 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 ZC3H7BQ9UGR2 993 aaKnown RBP11.3□□□□□ -0.6
RPE-202ENST00000359429 USP18Q9UMW8 372 aa11.3□□□□□ -0.6
RPE-202ENST00000359429 TBC1D30Q9Y2I9 924 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms