RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 TMED1Q13445 227 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 STXBP2Q15833 593 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 FASTKD1Q53R41 847 aaKnown RBP6.82□□□□□ -1.32
CSDE1-203ENST00000358528 IYDQ6PHW0 289 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 KRT27Q7Z3Y8 459 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 ULK2Q8IYT8 1036 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 DEFB107AQ8IZN7 70 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 FBXO27Q8NI29 283 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 TRAPPC12Q8WVT3 735 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 AKT1S1Q96B36 256 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 VCPIP1Q96JH7 1222 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 CDHR1Q96JP9 859 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 LRGUKQ96M69 825 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 GCNAQ96QF7 691 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 EBF4Q9BQW3 602 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 UNKQ9C0B0 810 aaKnown RBP6.82□□□□□ -1.32
CSDE1-203ENST00000358528 RSAD1Q9HA92 442 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 CLIC5Q9NZA1 410 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 DRG1Q9Y295 367 aaKnown RBP6.82□□□□□ -1.32
CSDE1-203ENST00000358528 LRRC42Q9Y546 428 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 COL14A1Q05707 1796 aaKnown RBP6.82□□□□□ -1.32
CSDE1-203ENST00000358528 COL22A1Q8NFW1 1626 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-203ENST00000358528 AHCYL1O43865 530 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 CREB3O43889 395 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 OATP04181 439 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 CXCL8P10145 99 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 GNAZP19086 355 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 SERPINB5P36952 375 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 HSD17B4P51659 736 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 GRIK3Q13003 919 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 AMHR2Q16671 573 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 HEATR6Q6AI08 1181 aaKnown RBP6.82□□□□□ -1.32
CSDE1-203ENST00000358528 IL31Q6EBC2 164 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 ADGRD1Q6QNK2 874 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 SAMD3Q8N6K7 520 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 BANPQ8N9N5 519 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 MIPOL1Q8TD10 442 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 CLEC4DQ8WXI8 215 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 WNK4Q96J92 1243 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 PHACTR1Q9C0D0 580 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 PPCSQ9HAB8 311 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 C17orf75Q9HAS0 396 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 XAB2Q9HCS7 855 aaKnown RBP6.82□□□□□ -1.32
CSDE1-203ENST00000358528 PAK5Q9P286 719 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 SLC17A6Q9P2U8 582 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 AKT3Q9Y243 479 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 DCXO43602 365 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 ATP9BO43861 1147 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 HMGCRP04035 888 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 P4HA1P13674 534 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 COPAP53621 1224 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 ROR2Q01974 943 aaKnown RBP6.82□□□□□ -1.32
CSDE1-203ENST00000358528 TTLL12Q14166 644 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-203ENST00000358528 ZC3H12AQ5D1E8 599 aaKnown RBP6.82□□□□□ -1.32
CSDE1-203ENST00000358528 N4BP2L1Q5TBK1 243 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-203ENST00000358528 VWA5B1Q5TIE3 1220 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 CNBD2Q96M20 576 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 STRA6Q9BX79 667 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 PDP2Q9P2J9 529 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 APPL1Q9UKG1 709 aa6.82□□□□□ -1.32
CSDE1-203ENST00000358528 CXorf49A8MYA2 514 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 E5RJQ4 531 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 LCP1P13796 627 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 GPD1P21695 349 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ADORA2BP29275 332 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 CNTN2Q02246 1040 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ITGA9Q13797 1035 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 CNGA3Q16281 694 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 RALGPS1Q5JS13 557 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 EFHC1Q5JVL4 640 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 FAM160B1Q5W0V3 765 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 CDHR3Q6ZTQ4 885 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 CCNYL1Q8N7R7 359 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 OR6B3Q8NGW1 331 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 PPWD1Q96BP3 646 aaKnown RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ANKRD27Q96NW4 1050 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 CPXM1Q96SM3 734 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ASCC2Q9H1I8 757 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 SLC38A10Q9HBR0 1119 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 DDX18Q9NVP1 670 aaKnown RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 RHBDL2Q9NX52 303 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ETAA1Q9NY74 926 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ZNF212Q9UDV6 495 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ZNRF3Q9ULT6 936 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 AK5Q9Y6K8 562 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 YDJCA8MPS7 323 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 STAMBPO95630 424 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 SUPT20HL2P0C7V6 817 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 STIP1P31948 543 aaKnown RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 GEN1Q17RS7 908 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 TRMT5Q32P41 509 aaKnown RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 MAP7D1Q3KQU3 841 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 SUPT20HL1Q3ZLR7 823 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 TRMT10BQ6PF06 316 aaKnown RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 SAMD7Q7Z3H4 446 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 TDRPQ86YL5 185 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 TREML1Q86YW5 311 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 UNC5BQ8IZJ1 945 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 B4GALNT2Q8NHY0 566 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 GDPD5Q8WTR4 605 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms