RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 SEZ6LQ9BYH1 1024 aa9.69□□□□□ -0.86
SMARCAL1-202ENST00000358207 ANO3Q9BYT9 981 aa9.69□□□□□ -0.86
SMARCAL1-202ENST00000358207 TBC1D23Q9NUY8 699 aa9.69□□□□□ -0.86
SMARCAL1-202ENST00000358207 CPA4Q9UI42 421 aa9.69□□□□□ -0.86
SMARCAL1-202ENST00000358207 RABGAP1Q9Y3P9 1069 aa9.69□□□□□ -0.86
SMARCAL1-202ENST00000358207 PCDHGA11Q9Y5H2 935 aa9.69□□□□□ -0.86
SMARCAL1-202ENST00000358207 HTTP42858 3142 aa9.69□□□□□ -0.86
SMARCAL1-202ENST00000358207 ABCB11O95342 1321 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 KLRC4O43908 158 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 ZWINTO95229 277 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 ACSL3O95573 720 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 MSL3P1P0C860 447 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 RARBP10826 455 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 RARGP13631 454 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 PLCG1P19174 1290 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 POLR2EP19388 210 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 CPA2P48052 419 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 PCYT1AP49585 367 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 APOFQ13790 326 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 SRRM1Q8IYB3 904 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 SUN5Q8TC36 379 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 SERPINB12Q96P63 405 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 TCF12Q99081 682 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 MRPS26Q9BYN8 205 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 SH3GLB2Q9NR46 395 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 DNAJB4Q9UDY4 337 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 RSL24D1Q9UHA3 163 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 TBK1Q9UHD2 729 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 ADAMTS1Q9UHI8 967 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 ERVK-11Q9UQG0 969 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 SLC15A5A6NIM6 579 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 PHF2O75151 1096 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 MYCP01106 439 aaPredicted RBP9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 ADSLP30566 484 aaPredicted RBP9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 NT5C2P49902 561 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 TUBA4AP68366 448 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 SEPT6Q14141 434 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 EGFLAMQ63HQ2 1017 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 FAM109BQ6ICB4 259 aaPredicted RBP9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 OTOAQ7RTW8 1153 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 PPM1KQ8N3J5 372 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 PCYOX1LQ8NBM8 494 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 LILRB4Q8NHJ6 448 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 RFWD2Q8NHY2 731 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 ZFRQ96KR1 1074 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 NPHS2Q9NP85 383 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 HACD3Q9P035 362 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 ARIH1Q9Y4X5 557 aaPredicted RBP9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 RIPK3Q9Y572 518 aa9.68□□□□□ -0.86
SMARCAL1-202ENST00000358207 LAMA3Q16787 3333 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 ANKRD63C9JTQ0 380 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 FAM86B1E9PN63 330 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 FARP2O94887 1054 aaPredicted RBP9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 FAM86B2P0C5J1 330 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 PMLP29590 882 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 HMOX2P30519 316 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 CLK3P49761 638 aaKnown RBP9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 STK4Q13043 487 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 SNX17Q15036 470 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 SLC18A3Q16572 532 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 CCDC58Q4VC31 144 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 ARSHQ5FYA8 562 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 TREML2Q5T2D2 321 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 WDR78Q5VTH9 848 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 KCNK18Q7Z418 384 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 DHDDSQ86SQ9 333 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 RHOT2Q8IXI1 618 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 ALLCQ8N6M5 410 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 CCDC110Q8TBZ0 833 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 RAET1EQ8TD07 263 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 HELQQ8TDG4 1101 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 PYDC1Q8WXC3 89 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 MED30Q96HR3 178 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 HES6Q96HZ4 224 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 CDK5RAP3Q96JB5 506 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 GCNAQ96QF7 691 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 RANBP9Q96S59 729 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 BCAS3Q9H6U6 928 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 FBXO6Q9NRD1 293 aaPredicted RBP9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 FKBP14Q9NWM8 211 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 NKIRAS1Q9NYS0 192 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 DCTN4Q9UJW0 460 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 APPL1Q9UKG1 709 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 PCDHA3Q9Y5H8 950 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 WDR91A4D1P6 747 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 PSMA7O14818 248 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 ZBTB39O15060 712 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 ICMTO60725 284 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 BAIAP3O94812 1187 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 DDHD2O94830 711 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 CSPG5O95196 566 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 INHAP05111 366 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 EIF2AK2P19525 551 aaKnown RBP9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 MUTP22033 750 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 NR4A1P22736 598 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 ARHGAP4P98171 946 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 IL9RQ01113 521 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 GRB14Q14449 540 aa9.67□□□□□ -0.86
SMARCAL1-202ENST00000358207 ECM1Q16610 540 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms