RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 FBXO43Q4G163 708 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 HHIPL2Q6UWX4 724 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 PROSER1Q86XN7 944 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TUBGCP3Q96CW5 907 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ASTN2O75129 1339 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 SH3PXD2BA1X283 911 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 GSPT2Q8IYD1 628 aaKnown RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ZBED8Q8IZ13 594 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 NDUFAF2Q8N183 169 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 DHRSXQ8N5I4 330 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 NCSTNQ92542 709 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 FAM84AQ96KN4 292 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 GPBP1L1Q9HC44 474 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 SETD1AO15047 1707 aaKnown RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 FGFR4P22455 802 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 KDSRQ06136 332 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 QPCTQ16769 361 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 KLHL12Q53G59 568 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 SCARA3Q6AZY7 606 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ABRAXAS1Q6UWZ7 409 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 CDC42EP4Q9H3Q1 356 aaKnown RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 LRRC40Q9H9A6 602 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ASAP1Q9ULH1 1129 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 CHMP2BQ9UQN3 213 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 K7ENM7 598 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 SIN3BO75182 1162 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 FAM155BO75949 473 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 IFNA8P32881 189 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 NPY2RP49146 381 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 FOLH1Q04609 750 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 PSMD5Q16401 504 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 C1orf54Q8WWF1 131 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 SLC13A1Q9BZW2 595 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TCF7L2Q9NQB0 619 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 CABYRO75952 493 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TGFB3P10600 412 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 PSMA4P25789 261 aaKnown RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TMBIM6P55061 237 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 CHRNB3Q05901 458 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 GMCL1P1Q8NEA9 526 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ADPGKQ9BRR6 497 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 CNGB3Q9NQW8 809 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TLL2Q9Y6L7 1015 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 USP1O94782 785 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 KCNJ2P63252 427 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 MYBPC3Q14896 1274 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 KCNV2Q8TDN2 545 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TRIM13O60858 407 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ADSSP30520 456 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 HTR7P34969 479 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 GRIK1P39086 918 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TKFCQ3LXA3 575 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 FAM13CQ8NE31 585 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 PIWIL2Q8TC59 973 aaKnown RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 A0A087X0B3 334 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 RCCD1A6NED2 376 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 E9PBE3 544 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 NME5P56597 212 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TSPY1Q01534 308 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 MTX3Q5HYI7 312 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 RHPN2Q8IUC4 686 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 MCOLN2Q8IZK6 566 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 BBS5Q8N3I7 341 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 YME1L1Q96TA2 773 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 COQ4Q9Y3A0 265 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TAF6LQ9Y6J9 622 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 E9PMD0 336 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 BACH1O14867 736 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TRIP10Q15642 601 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 FAM98BQ52LJ0 330 aaKnown RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 FAM47EQ6ZV65 393 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ADAT2Q7Z6V5 191 aaKnown RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ZDHHC13Q8IUH4 622 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ADHFE1Q8IWW8 467 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF555Q8NEP9 628 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TLR3O15455 904 aaKnown RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 SERPINI2O75830 405 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 SLC1A6P48664 564 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 CHI3L2Q15782 390 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ANO7Q6IWH7 933 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 PAIP1Q9H074 479 aaKnown RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 SIAEQ9HAT2 523 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TRPV5Q9NQA5 729 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ADAM30Q9UKF2 790 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 LOC110117498-PIK3R3F6TDL0 507 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 CYP27B1O15528 508 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 LDLRP01130 860 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 FCER1AP12319 257 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ABCB5Q2M3G0 1257 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 ANO4Q32M45 955 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TMEM270Q6UE05 265 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 PIK3R3Q92569 461 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 SPAG4Q9NPE6 437 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 CRNNQ9UBG3 495 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-204ENST00000358025 MAD2L2Q9UI95 211 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 TSC22D4Q9Y3Q8 395 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 VPS41P49754 854 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 JAM2P57087 298 aa4.25□□□□□ -1.73
SYNE2-204ENST00000358025 FRG1Q14331 258 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms