RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 KRT4P19013 534 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 TFE3P19532 575 aaPredicted RBP16.51■□□□□ 0.23
PHTF1-201ENST00000357783 IL4RP24394 825 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 ADORA2BP29275 332 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 STIP1P31948 543 aaKnown RBP16.51■□□□□ 0.23
PHTF1-201ENST00000357783 DNAJC3Q13217 504 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 SPARCL1Q14515 664 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 ZBTB6Q15916 424 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 SOWAHAQ2M3V2 549 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 PPP6R3Q5H9R7 873 aaPredicted RBP16.51■□□□□ 0.23
PHTF1-201ENST00000357783 C9orf57Q5W0N0 161 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 IQSEC1Q6DN90 963 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 TMEM110Q86TL2 294 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 IGDCC3Q8IVU1 814 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 FUKQ8N0W3 1084 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 CLEC4CQ8WTT0 213 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 PITPNM3Q9BZ71 974 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 TRIP12Q14669 1992 aaPredicted RBP16.51■□□□□ 0.23
PHTF1-201ENST00000357783 APOL1O14791 398 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 GSTA1P08263 222 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 ELK3P41970 407 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 BCAR1P56945 870 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 PDK2Q15119 407 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 MTFR1Q15390 333 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 SLC1A5Q15758 541 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 BOLA3Q53S33 107 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 PQLC3Q8N755 202 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 LRRC52Q8N7C0 313 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 FAF2Q96CS3 445 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 DOCK3Q8IZD9 2030 aa16.51■□□□□ 0.23
PHTF1-201ENST00000357783 SETSIPP0DME0 302 aa16.5■□□□□ 0.23
PHTF1-201ENST00000357783 XRCC4Q13426 336 aa16.5■□□□□ 0.23
PHTF1-201ENST00000357783 KLHL38Q2WGJ6 581 aa16.5■□□□□ 0.23
PHTF1-201ENST00000357783 CYB5D1Q6P9G0 228 aa16.5■□□□□ 0.23
PHTF1-201ENST00000357783 PCDH19Q8TAB3 1148 aa16.5■□□□□ 0.23
PHTF1-201ENST00000357783 THOC1Q96FV9 657 aaKnown RBP16.5■□□□□ 0.23
PHTF1-201ENST00000357783 RMDN2Q96LZ7 410 aa16.5■□□□□ 0.23
PHTF1-201ENST00000357783 RAB6BQ9NRW1 208 aa16.5■□□□□ 0.23
PHTF1-201ENST00000357783 DARSP14868 501 aaKnown RBP16.5■□□□□ 0.23
PHTF1-201ENST00000357783 HDAC4P56524 1084 aa16.5■□□□□ 0.23
PHTF1-201ENST00000357783 RASA2Q15283 850 aa16.5■□□□□ 0.23
PHTF1-201ENST00000357783 FAXCQ5TGI0 409 aa16.5■□□□□ 0.23
PHTF1-201ENST00000357783 USP29Q9HBJ7 922 aa16.5■□□□□ 0.23
PHTF1-201ENST00000357783 PRKAG3Q9UGI9 489 aa16.5■□□□□ 0.23
PHTF1-201ENST00000357783 PIN4Q9Y237 131 aaKnown RBP16.5■□□□□ 0.23
PHTF1-201ENST00000357783 SMAPO00193 183 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 TYROBPO43914 113 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 AVILO75366 819 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 FGFR1P11362 822 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 RBL1P28749 1068 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 MSH2P43246 934 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 ATXN1P54253 815 aaKnown RBP16.49■□□□□ 0.23
PHTF1-201ENST00000357783 HIC1Q14526 733 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 KCNJ11Q14654 390 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 HHATQ5VTY9 493 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 TEKT4Q8WW24 435 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 DNAJB3Q8WWF6 145 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 PARK7Q99497 189 aaKnown RBP16.49■□□□□ 0.23
PHTF1-201ENST00000357783 KLF6Q99612 283 aaPredicted RBP16.49■□□□□ 0.23
PHTF1-201ENST00000357783 CNTN3Q9P232 1028 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 PDCD11Q14690 1871 aaKnown RBP16.49■□□□□ 0.23
PHTF1-201ENST00000357783 IQCA1LA6NCM1 817 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 GOLGA8RI6L899 631 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 ZBED1O96006 694 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 LCP1P13796 627 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 ADGRD1Q6QNK2 874 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 SUGP1Q8IWZ8 645 aaKnown RBP16.49■□□□□ 0.23
PHTF1-201ENST00000357783 DCAKDQ8WVC6 231 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 TMEM40Q8WWA1 233 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 PTPN18Q99952 460 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 DHRS4Q9BTZ2 278 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 SLCO1B3Q9NPD5 702 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 SCN4AP35499 1836 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 NRCAMQ92823 1304 aa16.49■□□□□ 0.23
PHTF1-201ENST00000357783 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.48■□□□□ 0.23
PHTF1-201ENST00000357783 KBTBD13C9JR72 458 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 F2P00734 622 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 ATP2A2P16615 1042 aaKnown RBP16.48■□□□□ 0.23
PHTF1-201ENST00000357783 DESP17661 470 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 TGM2P21980 687 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 LMO2P25791 158 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 GBP2P32456 591 aaPredicted RBP16.48■□□□□ 0.23
PHTF1-201ENST00000357783 SLC18A1P54219 525 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 YWHAGP61981 247 aaKnown RBP eCLIP16.48■□□□□ 0.23
PHTF1-201ENST00000357783 FBXO47Q5MNV8 452 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 ZNF618Q5T7W0 954 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 ALKAL1Q6UXT8 129 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 UNC93AQ86WB7 457 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 CCDC63Q8NA47 563 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 KBTBD7Q8WVZ9 684 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 GOLGA2P5Q9HBQ8 144 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 GEMIN8Q9NWZ8 242 aaKnown RBP16.48■□□□□ 0.23
PHTF1-201ENST00000357783 PAK5Q9P286 719 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 KLHL14Q9P2G3 628 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 FETUBQ9UGM5 382 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 UBQLN1Q9UMX0 589 aaKnown RBP16.48■□□□□ 0.23
PHTF1-201ENST00000357783 SPTLC1O15269 473 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 MNAT1P51948 309 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 MGAT5Q09328 741 aa16.48■□□□□ 0.23
PHTF1-201ENST00000357783 PDK4Q16654 411 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms