RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 MCRS1Q96EZ8 462 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 NAP1L5Q96NT1 182 aaPredicted RBP9.59□□□□□ -0.87
UPF2-202ENST00000357604 RUFY1Q96T51 708 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 RXFP1Q9HBX9 757 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 EVA1BQ9NVM1 165 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 ARGLU1Q9NWB6 273 aaPredicted RBP9.59□□□□□ -0.87
UPF2-202ENST00000357604 FOXN3O00409 490 aaPredicted RBP9.59□□□□□ -0.87
UPF2-202ENST00000357604 APOL1O14791 398 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 TJP3O95049 919 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 RHOCP08134 193 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 PBX3P40426 434 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 SLC45A4Q5BKX6 768 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 TMCO2Q7Z6W1 182 aaPredicted RBP9.59□□□□□ -0.87
UPF2-202ENST00000357604 KIF18AQ8NI77 898 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 KCTD13Q8WZ19 329 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 PCED1BQ96HM7 432 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 MCEEQ96PE7 176 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 CFAP97Q9P2B7 532 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 FBXW11Q9UKB1 542 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 PCDHGC3Q9UN70 934 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 PTGESO14684 152 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 SRGAP2O75044 1071 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 OR4Q2P0C623 313 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 TMEM253P0C7T8 217 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 MX2P20592 715 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 NOS2P35228 1153 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 POLD3Q15054 466 aaPredicted RBP9.59□□□□□ -0.87
UPF2-202ENST00000357604 BOLA3Q53S33 107 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 CMASQ8NFW8 434 aaPredicted RBP9.59□□□□□ -0.87
UPF2-202ENST00000357604 FGFBP2Q9BYJ0 223 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 GPR62Q9BZJ7 368 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 ZMYND15Q9H091 742 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 SIK2Q9H0K1 926 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 PPARGP37231 505 aaPredicted RBP9.59□□□□□ -0.87
UPF2-202ENST00000357604 RWDD2BP57060 319 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 PDCLQ13371 301 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 ZNF235Q14590 738 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 PDK2Q15119 407 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 XKR4Q5GH76 650 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 BRMS1LQ5PSV4 323 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 PTCRAQ6ISU1 281 aaPredicted RBP9.59□□□□□ -0.87
UPF2-202ENST00000357604 TIGD7Q6NT04 549 aaPredicted RBP9.59□□□□□ -0.87
UPF2-202ENST00000357604 RNF19BQ6ZMZ0 732 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 RTN4RL1Q86UN2 441 aaPredicted RBP9.59□□□□□ -0.87
UPF2-202ENST00000357604 ATAD1Q8NBU5 361 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.59□□□□□ -0.871e-6■■■■■ 44.5
UPF2-202ENST00000357604 TSNARE1Q96NA8 513 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 CDX2Q99626 313 aaPredicted RBP9.59□□□□□ -0.87
UPF2-202ENST00000357604 DHX35Q9H5Z1 703 aaKnown RBP9.59□□□□□ -0.87
UPF2-202ENST00000357604 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.59□□□□□ -0.87
UPF2-202ENST00000357604 KIAA1217Q5T5P2 1943 aa9.59□□□□□ -0.87
UPF2-202ENST00000357604 H7C0C1 242 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 GRM6O15303 877 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 ATP5OP48047 213 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 EPHB1P54762 984 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 HIC1Q14526 733 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 IQCB1Q15051 598 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 NAB2Q15742 525 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 ZNF569Q5MCW4 686 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 SLFN11Q7Z7L1 901 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 RCOR2Q8IZ40 523 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 ATPAF2Q8N5M1 289 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 TBC1D31Q96DN5 1066 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 TMA16Q96EY4 203 aaKnown RBP9.58□□□□□ -0.88
UPF2-202ENST00000357604 PPP1R16AQ96I34 528 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 NAPGQ99747 312 aaPredicted RBP9.58□□□□□ -0.88
UPF2-202ENST00000357604 CXXC1Q9P0U4 656 aaPredicted RBP9.58□□□□□ -0.88
UPF2-202ENST00000357604 PRKAG3Q9UGI9 489 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 SCML2Q9UQR0 700 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 COQ4Q9Y3A0 265 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 FGF10O15520 208 aaPredicted RBP9.58□□□□□ -0.88
UPF2-202ENST00000357604 POU2F2P09086 479 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 CYP2F1P24903 491 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 SLC18A3Q16572 532 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 GJB7Q6PEY0 223 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 CRELD2Q6UXH1 353 aaPredicted RBP9.58□□□□□ -0.88
UPF2-202ENST00000357604 ACDQ96AP0 544 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 B3GNT5Q9BYG0 378 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 LZTFL1Q9NQ48 299 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 YBX2Q9Y2T7 364 aaKnown RBP9.58□□□□□ -0.88
UPF2-202ENST00000357604 PIK3R2O00459 728 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 TLR5O60602 858 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 VNN1O95497 513 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 MMEP08473 750 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 PBX2P40425 430 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 TAF10Q12962 218 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 PPP1R26Q5T8A7 1209 aaPredicted RBP9.58□□□□□ -0.88
UPF2-202ENST00000357604 IL31Q6EBC2 164 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 FAM71AQ8IYT1 594 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 BBOF1Q8ND07 529 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 RPRD1AQ96P16 312 aaPredicted RBP9.58□□□□□ -0.88
UPF2-202ENST00000357604 TBCBQ99426 244 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 CNPY3Q9BT09 278 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 LRRD1A4D1F6 860 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 NDUFA10O95299 355 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 MYOGP15173 224 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 MNX1P50219 401 aaPredicted RBP9.58□□□□□ -0.88
UPF2-202ENST00000357604 INCA1Q0VD86 236 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 LAMB3Q13751 1172 aa9.58□□□□□ -0.88
UPF2-202ENST00000357604 C15orf39Q6ZRI6 1047 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms