RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 HSF5Q4G112 596 aaPredicted RBP10.83□□□□□ -0.68
LINC01560-201ENST00000357412 N4BP2L1Q5TBK1 243 aaPredicted RBP10.83□□□□□ -0.68
LINC01560-201ENST00000357412 RNF43Q68DV7 783 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 SPOPLQ6IQ16 392 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 C11orf74Q86VG3 221 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 UNC93AQ86WB7 457 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 BBS7Q8IWZ6 715 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 C12orf29Q8N999 325 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 SLC2A14Q8TDB8 520 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 TMC2Q8TDI7 906 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 TAF4BQ92750 862 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 OTUB2Q96DC9 234 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 CHAMP1Q96JM3 812 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 ARHGEF4Q9NR80 690 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 TRAF3IP3Q9Y228 551 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 ATP8B3O60423 1300 aa10.83□□□□□ -0.68
LINC01560-201ENST00000357412 CNOT1A5YKK6 2376 aaKnown RBP10.82□□□□□ -0.68
LINC01560-201ENST00000357412 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.82□□□□□ -0.68
LINC01560-201ENST00000357412 KLF8O95600 359 aaPredicted RBP10.82□□□□□ -0.68
LINC01560-201ENST00000357412 TBX18O95935 607 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 MYL1P05976 194 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 P4HA1P13674 534 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 TNFRSF4P43489 277 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 MAP3K7CLP57077 242 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 TMEM25Q86YD3 366 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 NAT16Q8N8M0 369 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 SPRYD3Q8NCJ5 442 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 RLN3Q8WXF3 142 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 TWNKQ96RR1 684 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 EDEM2Q9BV94 578 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 APOBEC3GQ9HC16 384 aaKnown RBP10.82□□□□□ -0.68
LINC01560-201ENST00000357412 ZDHHC4Q9NPG8 344 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 FAM49BQ9NUQ9 324 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 OSER1Q9NX31 292 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 HCN2Q9UL51 889 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 SH3BP1Q9Y3L3 701 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 CHD8Q9HCK8 2581 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 PDCD11Q14690 1871 aaKnown RBP10.82□□□□□ -0.68
LINC01560-201ENST00000357412 MIA3Q5JRA6 1907 aa10.82□□□□□ -0.68
LINC01560-201ENST00000357412 CACNA1BQ00975 2339 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 FAM237AA0A1B0GTK4 181 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 LNP1A1A4G5 178 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 TBC1D3BA6NDS4 549 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 C4orf47A7E2U8 309 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 HHLA1C9JL84 531 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 TRIM24O15164 1050 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 TLR5O60602 858 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 TULP3O75386 442 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 KRT37O76014 449 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 ALDH1A2O94788 518 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 CLSTN1O94985 981 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 KCNK5O95279 499 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 HLA-DRAP01903 254 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 PRR29P0C7W0 189 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 P2RY2P41231 377 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 VAMP7P51809 220 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 KDSRQ06136 332 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 PPP3CAQ08209 521 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 INCA1Q0VD86 236 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 MAP7D1Q3KQU3 841 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 EOGTQ5NDL2 527 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 CEP135Q66GS9 1140 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 HTR3DQ70Z44 454 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 GPRIN1Q7Z2K8 1008 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 TTC30AQ86WT1 665 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 MIB1Q86YT6 1006 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 FRMD1Q8N878 549 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 HNRNPABQ99729 332 aaKnown RBP10.81□□□□□ -0.68
LINC01560-201ENST00000357412 KLF16Q9BXK1 252 aaPredicted RBP10.81□□□□□ -0.68
LINC01560-201ENST00000357412 NACA2Q9H009 215 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 FBXO44Q9H4M3 255 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 NMUR1Q9HB89 426 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 POLMQ9NP87 494 aaPredicted RBP10.81□□□□□ -0.68
LINC01560-201ENST00000357412 CYLDQ9NQC7 956 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.81□□□□□ -0.68
LINC01560-201ENST00000357412 SPHK2Q9NRA0 654 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 DEC1Q9P2X7 70 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 USP25Q9UHP3 1055 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 FRMD4BQ9Y2L6 1034 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 ZDHHC9Q9Y397 364 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 TICRRQ7Z2Z1 1910 aa10.81□□□□□ -0.68
LINC01560-201ENST00000357412 PATE3B3GLJ2 98 aa10.8□□□□□ -0.68
LINC01560-201ENST00000357412 CDX4O14627 284 aaPredicted RBP10.8□□□□□ -0.68
LINC01560-201ENST00000357412 KHNYNO15037 678 aaKnown RBP10.8□□□□□ -0.68
LINC01560-201ENST00000357412 MAPK13O15264 365 aa10.8□□□□□ -0.68
LINC01560-201ENST00000357412 CALUO43852 315 aaPredicted RBP10.8□□□□□ -0.68
LINC01560-201ENST00000357412 RHOBTB3O94955 611 aa10.8□□□□□ -0.68
LINC01560-201ENST00000357412 FAM200BP0CF97 657 aa10.8□□□□□ -0.68
LINC01560-201ENST00000357412 IRF1P10914 325 aa10.8□□□□□ -0.68
LINC01560-201ENST00000357412 ADORA2BP29275 332 aa10.8□□□□□ -0.68
LINC01560-201ENST00000357412 PTGER3P43115 390 aa10.8□□□□□ -0.68
LINC01560-201ENST00000357412 GCLMP48507 274 aa10.8□□□□□ -0.68
LINC01560-201ENST00000357412 DHPSP49366 369 aaPredicted RBP10.8□□□□□ -0.68
LINC01560-201ENST00000357412 NDUFA8P51970 172 aa10.8□□□□□ -0.68
LINC01560-201ENST00000357412 MCCD1P59942 119 aaPredicted RBP10.8□□□□□ -0.68
LINC01560-201ENST00000357412 SHC2P98077 582 aa10.8□□□□□ -0.68
LINC01560-201ENST00000357412 DPYDQ12882 1025 aa10.8□□□□□ -0.68
LINC01560-201ENST00000357412 NFIL3Q16649 462 aa10.8□□□□□ -0.68
LINC01560-201ENST00000357412 ANO4Q32M45 955 aa10.8□□□□□ -0.68
LINC01560-201ENST00000357412 BTBD8Q5XKL5 378 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms