RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 PREBQ9HCU5 417 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 CCDC78A2IDD5 438 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 TBC1D12O60347 775 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 SLC4A1P02730 911 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 IMPDH2P12268 514 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 IL1R1P14778 569 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 MAGEA8P43361 318 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 GPC3P51654 580 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 TBL3Q12788 808 aaKnown RBP13.01□□□□□ -0.33
BDNF-202ENST00000356660 SLC15A2Q16348 729 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 CCDC80Q76M96 950 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 NET1Q7Z628 596 aaPredicted RBP13.01□□□□□ -0.33
BDNF-202ENST00000356660 DEFB132Q7Z7B7 95 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 DAW1Q8N136 415 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 LMO3Q8TAP4 145 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 NRG4Q8WWG1 115 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 SPATA16Q9BXB7 569 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 SNX25Q9H3E2 840 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 JPH1Q9HDC5 661 aaPredicted RBP13.01□□□□□ -0.33
BDNF-202ENST00000356660 IL1RAPL1Q9NZN1 696 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 EPS15L1Q9UBC2 864 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 PKD1L3Q7Z443 1732 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 GOLGA4Q13439 2230 aaKnown RBP13.01□□□□□ -0.33
BDNF-202ENST00000356660 TCRBV9S1A1TA0A576 114 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 RBM47A0AV96 593 aaKnown RBP13.01□□□□□ -0.33
BDNF-202ENST00000356660 CAPN8A6NHC0 703 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 LYPLA1O75608 230 aaPredicted RBP13.01□□□□□ -0.33
BDNF-202ENST00000356660 UNC45BQ8IWX7 931 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 CERS5Q8N5B7 392 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 ZBTB45Q96K62 511 aaPredicted RBP13.01□□□□□ -0.33
BDNF-202ENST00000356660 KCNK16Q96T55 309 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.01□□□□□ -0.33
BDNF-202ENST00000356660 GPATCH2LQ9NWQ4 482 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 ATXN10Q9UBB4 475 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 SLC7A8Q9UHI5 535 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 RABGEF1Q9UJ41 708 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 AK5Q9Y6K8 562 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 NUP188Q5SRE5 1749 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 TIAM2Q8IVF5 1701 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 ECM29Q5VYK3 1845 aa13.01□□□□□ -0.33
BDNF-202ENST00000356660 TJP1Q07157 1748 aa13□□□□□ -0.33
BDNF-202ENST00000356660 NFIBO00712 420 aa13□□□□□ -0.33
BDNF-202ENST00000356660 PEX2P28328 305 aa13□□□□□ -0.33
BDNF-202ENST00000356660 CDK7P50613 346 aa13□□□□□ -0.33
BDNF-202ENST00000356660 GCNT1Q02742 428 aa13□□□□□ -0.33
BDNF-202ENST00000356660 FLOT2Q14254 428 aa13□□□□□ -0.33
BDNF-202ENST00000356660 USP13Q92995 863 aaPredicted RBP13□□□□□ -0.33
BDNF-202ENST00000356660 COMMD3-BMI1R4GMX3 469 aa13□□□□□ -0.33
BDNF-202ENST00000356660 MTA2O94776 668 aa13□□□□□ -0.33
BDNF-202ENST00000356660 ZBTB48P10074 688 aaPredicted RBP13□□□□□ -0.33
BDNF-202ENST00000356660 CCNA1P78396 465 aa13□□□□□ -0.33
BDNF-202ENST00000356660 FASTKD1Q53R41 847 aaKnown RBP13□□□□□ -0.33
BDNF-202ENST00000356660 RALGPS1Q5JS13 557 aa13□□□□□ -0.33
BDNF-202ENST00000356660 DPY19L2P1Q6NXN4 242 aa13□□□□□ -0.33
BDNF-202ENST00000356660 NPNTQ6UXI9 565 aa13□□□□□ -0.33
BDNF-202ENST00000356660 SERAC1Q96JX3 654 aa13□□□□□ -0.33
BDNF-202ENST00000356660 ACAD9Q9H845 621 aa13□□□□□ -0.33
BDNF-202ENST00000356660 SPC25Q9HBM1 224 aa13□□□□□ -0.33
BDNF-202ENST00000356660 MAN1C1Q9NR34 630 aa13□□□□□ -0.33
BDNF-202ENST00000356660 KCNK4Q9NYG8 393 aa13□□□□□ -0.33
BDNF-202ENST00000356660 TMCC1O94876 653 aa13□□□□□ -0.33
BDNF-202ENST00000356660 NELFEP18615 380 aaKnown RBP13□□□□□ -0.33
BDNF-202ENST00000356660 TM4SF1P30408 202 aa13□□□□□ -0.33
BDNF-202ENST00000356660 ARPP19P56211 112 aa13□□□□□ -0.33
BDNF-202ENST00000356660 MRPS22P82650 360 aaKnown RBP13□□□□□ -0.33
BDNF-202ENST00000356660 ANKRD20A4Q4UJ75 823 aa13□□□□□ -0.33
BDNF-202ENST00000356660 SLC44A4Q53GD3 710 aa13□□□□□ -0.33
BDNF-202ENST00000356660 TXNRD3NBQ6F5E7 133 aa13□□□□□ -0.33
BDNF-202ENST00000356660 PPP1R2P3Q6NXS1 205 aa13□□□□□ -0.33
BDNF-202ENST00000356660 FAM151AQ8WW52 585 aa13□□□□□ -0.33
BDNF-202ENST00000356660 PGBD4Q96DM1 585 aa13□□□□□ -0.33
BDNF-202ENST00000356660 LNPEPQ9UIQ6 1025 aa13□□□□□ -0.33
BDNF-202ENST00000356660 LAMB4A4D0S4 1761 aa13□□□□□ -0.33
BDNF-202ENST00000356660 M0QYV0 167 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 TM7SF2O76062 418 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 SRGAP2BP0DMP2 458 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 RARBP10826 455 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 GALK1P51570 392 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 STAT5BP51692 787 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 ADARP55265 1226 aaKnown RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 NLRP11P59045 1033 aaKnown RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 OASLQ15646 514 aaKnown RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 EFHC2Q5JST6 749 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 ANGEL2Q5VTE6 544 aaKnown RBP12.99□□□□□ -0.33
BDNF-202ENST00000356660 LRRC71Q8N4P6 559 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 KCTD17Q8N5Z5 321 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 CCNYL1Q8N7R7 359 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 PHF12Q96QT6 1004 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 TIPINQ9BVW5 301 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 DEFB129Q9H1M3 183 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 STRIP2Q9ULQ0 834 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 NENFQ9UMX5 172 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 MYH11P35749 1972 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 GAKO14976 1311 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 ENTPD3O75355 529 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 GPC4O75487 556 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 OR6B1O95007 311 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 MUTP22033 750 aa12.99□□□□□ -0.33
BDNF-202ENST00000356660 SFNP31947 248 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms