RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 CNPP09543 421 aaKnown RBP6.67□□□□□ -1.34
UPF2-201ENST00000356352 YWHAQP27348 245 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 SERPINB3P29508 390 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 CSE1LP55060 971 aaKnown RBP6.67□□□□□ -1.34
UPF2-201ENST00000356352 RHOAP61586 193 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 BTKQ06187 659 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 NFIAQ12857 509 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 NFYCQ13952 458 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 EZH2Q15910 746 aaKnown RBP6.67□□□□□ -1.34
UPF2-201ENST00000356352 LRRC36Q1X8D7 754 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 SMTNL2Q2TAL5 461 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 SEL1L3Q68CR1 1132 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 PRR5LQ6MZQ0 368 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 PLEKHH3Q7Z736 793 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 LRRC6Q86X45 466 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 ZDHHC17Q8IUH5 632 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 LRRC71Q8N4P6 559 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 MOSPD2Q8NHP6 518 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 TPCN2Q8NHX9 752 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 FAM45AQ8TCE6 357 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 TMC2Q8TDI7 906 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 PPP1R10Q96QC0 940 aaKnown RBP6.67□□□□□ -1.34
UPF2-201ENST00000356352 COMMD8Q9NX08 183 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 AP3M1Q9Y2T2 418 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 IQGAP3Q86VI3 1631 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 hCG_2014768A0A024R1R8 64 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 E9PBE3 544 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 PMPCBO75439 489 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 DGKIO75912 1065 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 DLGAP3O95886 979 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 ZNF23P17027 643 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 FMR1Q06787 632 aaKnown RBP eCLIP6.67□□□□□ -1.34
UPF2-201ENST00000356352 GNA13Q14344 377 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 ZC2HC1CQ53FD0 456 aaPredicted RBP6.67□□□□□ -1.34
UPF2-201ENST00000356352 KDM7AQ6ZMT4 941 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.67□□□□□ -1.34
UPF2-201ENST00000356352 CHP1Q99653 195 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 NFKBIZQ9BYH8 718 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 PRDM16Q9HAZ2 1276 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 AGPAT3Q9NRZ7 376 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 CDC42BPBQ9Y5S2 1711 aa6.67□□□□□ -1.34
UPF2-201ENST00000356352 A0A0A6YYK5 440 aaPredicted RBP6.66□□□□□ -1.34
UPF2-201ENST00000356352 XPO1O14980 1071 aaKnown RBP6.66□□□□□ -1.34
UPF2-201ENST00000356352 TBC1D12O60347 775 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 CLTBP09497 229 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 TPBGLP0DKB5 382 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 CKBP12277 381 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 HIRAP54198 1017 aaPredicted RBP6.66□□□□□ -1.34
UPF2-201ENST00000356352 YWHAZP63104 245 aaKnown RBP6.66□□□□□ -1.34
UPF2-201ENST00000356352 CCZ1BP86790 482 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 CCZ1P86791 482 aaPredicted RBP6.66□□□□□ -1.34
UPF2-201ENST00000356352 STK4Q13043 487 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 MTF1Q14872 753 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 TRIM16LQ309B1 348 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 PGS1Q32NB8 556 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 EXD1Q8NHP7 514 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 TLR8Q9NR97 1041 aaKnown RBP6.66□□□□□ -1.34
UPF2-201ENST00000356352 SLC24A2Q9UI40 661 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 ITGA11Q9UKX5 1188 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 CYB561D2O14569 222 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 TEX28O15482 410 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 KRT6AP02538 564 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 KRT6BP04259 564 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 PABPC1P11940 636 aaKnown RBP6.66□□□□□ -1.34
UPF2-201ENST00000356352 PSMC3P17980 439 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 CHRNA5P30532 468 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 KRT6CP48668 564 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 RAD23AP54725 363 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 HUNKP57058 714 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 MAPK7Q13164 816 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 NAB1Q13506 487 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 MYBPC2Q14324 1141 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 STARD3Q14849 445 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 PLCL1Q15111 1095 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 NFE2Q16621 373 aaPredicted RBP6.66□□□□□ -1.34
UPF2-201ENST00000356352 PTGISQ16647 500 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 CTXN3Q4LDR2 81 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 ATAD3BQ5T9A4 648 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 ZNF786Q8N393 782 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 SVOPQ8N4V2 548 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 AGPAT5Q9NUQ2 364 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 NCKIPSDQ9NZQ3 722 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 KLHL3Q9UH77 587 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 TAGLN3Q9UI15 199 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 PADI4Q9UM07 663 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 PHTF1Q9UMS5 762 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 HPS5Q9UPZ3 1129 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 ANKRD6Q9Y2G4 727 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 CENPXA8MT69 81 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 TRIM13O60858 407 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 CSF1RP07333 972 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 CYP2A6P11509 494 aaPredicted RBP6.66□□□□□ -1.34
UPF2-201ENST00000356352 PCNAP12004 261 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 CALB2P22676 271 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 IFNGR2P38484 337 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 GMPSP49915 693 aaPredicted RBP6.66□□□□□ -1.34
UPF2-201ENST00000356352 BST2Q10589 180 aaKnown RBP6.66□□□□□ -1.34
UPF2-201ENST00000356352 GALNTL6Q49A17 601 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 SNX30Q5VWJ9 437 aa6.66□□□□□ -1.34
UPF2-201ENST00000356352 LAYNQ6UX15 382 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms