RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 TRAPPC9Q96Q05 1148 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 CPXM1Q96SM3 734 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 TUBB6Q9BUF5 446 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 SSU72Q9NP77 194 aaKnown RBP10.54□□□□□ -0.72
PTPRA-203ENST00000356147 ZNF70Q9UC06 446 aaPredicted RBP10.54□□□□□ -0.72
PTPRA-203ENST00000356147 ZC3H7BQ9UGR2 993 aaKnown RBP10.54□□□□□ -0.72
PTPRA-203ENST00000356147 TAGLN3Q9UI15 199 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 ADAMTS6Q9UKP5 1117 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 PCDHGB4Q9UN71 923 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 PCDHGB5Q9Y5G0 923 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 NFASCO94856 1347 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 STBD1O95210 358 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 PROCP04070 461 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 RXRBP28702 533 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 SERPINB6P35237 376 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 RAP1GDS1P52306 607 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 CDH6P55285 790 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 SLC18A2Q05940 514 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 C15orf59Q2T9L4 293 aaPredicted RBP10.54□□□□□ -0.72
PTPRA-203ENST00000356147 LIN52Q52LA3 116 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 SLC27A3Q5K4L6 730 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 SPDYAQ5MJ70 313 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 SCYL2Q6P3W7 929 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 CHSY1Q86X52 802 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 CRLF3Q8IUI8 442 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 CEP120Q8N960 986 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 MOCOSQ96EN8 888 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 SPATA16Q9BXB7 569 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.54□□□□□ -0.72
PTPRA-203ENST00000356147 ETNK2Q9NVF9 386 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 PDP2Q9P2J9 529 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 FZD1Q9UP38 647 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 PLLPQ9Y342 182 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 TEX264Q9Y6I9 313 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 AK5Q9Y6K8 562 aa10.54□□□□□ -0.72
PTPRA-203ENST00000356147 A0A088AWK7 358 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 A8MXQ7 604 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 E7ESA3 106 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 H0YIN7 160 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 RFPL1O75677 317 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 EMC2Q15006 297 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 GRAMD1BQ3KR37 738 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 BSPRYQ5W0U4 402 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 ATG14Q6ZNE5 492 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 BBS12Q6ZW61 710 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 SLC26A11Q86WA9 606 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 ZFAND2BQ8WV99 257 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 PIWIL1Q96J94 861 aaKnown RBP10.53□□□□□ -0.72
PTPRA-203ENST00000356147 PEBP4Q96S96 227 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 MAGEB5Q9BZ81 275 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 MMADHCQ9H3L0 296 aaPredicted RBP10.53□□□□□ -0.72
PTPRA-203ENST00000356147 PLAC1Q9HBJ0 212 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 DDX56Q9NY93 547 aaKnown RBP10.53□□□□□ -0.72
PTPRA-203ENST00000356147 TTLL3Q9Y4R7 772 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 LTBP1Q14766 1721 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 CCDC160A6NGH7 325 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 PEX10O60683 326 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 DGAT1O75907 488 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 TGDSO95455 350 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 NR3C2P08235 984 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 YWHAZP63104 245 aaKnown RBP10.53□□□□□ -0.72
PTPRA-203ENST00000356147 TRIP10Q15642 601 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 TTC39BQ5VTQ0 682 aaPredicted RBP10.53□□□□□ -0.72
PTPRA-203ENST00000356147 PAOXQ6QHF9 649 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 ARHGAP22Q7Z5H3 698 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 NET1Q7Z628 596 aaPredicted RBP10.53□□□□□ -0.72
PTPRA-203ENST00000356147 HPS6Q86YV9 775 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 GCNAQ96QF7 691 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 CCDC106Q9BWC9 280 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 WWP1Q9H0M0 922 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 MAN1C1Q9NR34 630 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 KCNK4Q9NYG8 393 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 DNAJC16Q9Y2G8 782 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 HBS1LQ9Y450 684 aaKnown RBP10.53□□□□□ -0.72
PTPRA-203ENST00000356147 CNTNAP2Q9UHC6 1331 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 BUD23O43709 281 aaKnown RBP10.53□□□□□ -0.72
PTPRA-203ENST00000356147 MAGEC1O60732 1142 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 RGS20O76081 388 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 ERBB2P04626 1255 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 SNRPAP09012 282 aaKnown RBP10.53□□□□□ -0.72
PTPRA-203ENST00000356147 RBL1P28749 1068 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 ROR1Q01973 937 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 TRMT5Q32P41 509 aaKnown RBP10.53□□□□□ -0.72
PTPRA-203ENST00000356147 LRRC38Q5VT99 294 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 DPY19L2Q6NUT2 758 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 MCF2L2Q86YR7 1114 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 THNSL1Q8IYQ7 743 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 OR6Y1Q8NGX8 325 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 UBA3Q8TBC4 463 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 ATP6V0A1Q93050 837 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 ZNF778Q96MU6 729 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 HMGXB4Q9UGU5 601 aa10.53□□□□□ -0.72
PTPRA-203ENST00000356147 DOCK5Q9H7D0 1870 aa10.52□□□□□ -0.72
PTPRA-203ENST00000356147 KRT37O76014 449 aa10.52□□□□□ -0.72
PTPRA-203ENST00000356147 NCF2P19878 526 aaPredicted RBP10.52□□□□□ -0.72
PTPRA-203ENST00000356147 TBXAS1P24557 533 aaPredicted RBP10.52□□□□□ -0.72
PTPRA-203ENST00000356147 ADORA2AP29274 412 aa10.52□□□□□ -0.72
PTPRA-203ENST00000356147 SFNP31947 248 aa10.52□□□□□ -0.72
PTPRA-203ENST00000356147 ACTR2P61160 394 aa10.52□□□□□ -0.72
PTPRA-203ENST00000356147 STX3Q13277 289 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms