RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ZSCAN5DPP0CG00 497 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 HSD17B4P51659 736 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 ATXN3P54252 364 aaPredicted RBP12.78□□□□□ -0.36
COLCA1-201ENST00000355430 CTXN3Q4LDR2 81 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 NAIF1Q69YI7 327 aaPredicted RBP12.78□□□□□ -0.36
COLCA1-201ENST00000355430 ZBTB10Q96DT7 871 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 CGRRF1Q99675 332 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 KLK14Q9P0G3 267 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 ROBO3Q96MS0 1386 aa12.78□□□□□ -0.36
COLCA1-201ENST00000355430 LOC100653049A0A140TA62 436 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 PSMD10O75832 226 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 KRT34O76011 436 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 KLHL2O95198 593 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 ADRB2P07550 413 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 IRF1P10914 325 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 GNL1P36915 607 aaPredicted RBP12.77□□□□□ -0.36
COLCA1-201ENST00000355430 VCPP55072 806 aaKnown RBP12.77□□□□□ -0.36
COLCA1-201ENST00000355430 TTC23LQ6PF05 361 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 ZNF572Q7Z3I7 529 aaPredicted RBP12.77□□□□□ -0.36
COLCA1-201ENST00000355430 LRRC57Q8N9N7 239 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 REPS2Q8NFH8 660 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 GAS2L1Q99501 681 aaPredicted RBP12.77□□□□□ -0.36
COLCA1-201ENST00000355430 MAGEB5Q9BZ81 275 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 PLEKHA5Q9HAU0 1116 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 A1CFQ9NQ94 594 aaKnown RBP12.77□□□□□ -0.36
COLCA1-201ENST00000355430 AXLP30530 894 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 SSTR1P30872 391 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 RANBP1P43487 201 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 MMP13P45452 471 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 RAP1GAPP47736 663 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 MCL1Q07820 350 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 ZCWPW2Q504Y3 356 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 TCP10LQ8TDR4 215 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 ABI2Q9NYB9 513 aaPredicted RBP12.77□□□□□ -0.36
COLCA1-201ENST00000355430 DOLKQ9UPQ8 538 aa12.77□□□□□ -0.36
COLCA1-201ENST00000355430 XYLBO75191 536 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 CALB2P22676 271 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 EEF1B2P24534 225 aaKnown RBP12.77□□□□□ -0.37
COLCA1-201ENST00000355430 KLRC2P26717 231 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 RPA3P35244 121 aaPredicted RBP12.77□□□□□ -0.37
COLCA1-201ENST00000355430 SULT1E1P49888 294 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 DRG2P55039 364 aaKnown RBP12.77□□□□□ -0.37
COLCA1-201ENST00000355430 RASA2Q15283 850 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 CNGA3Q16281 694 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 BMT2Q1RMZ1 405 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 MPZL3Q6UWV2 235 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 MFSD7Q6UXD7 560 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 NIPA1Q7RTP0 329 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 ATP6V1E2Q96A05 226 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 OSMRQ99650 979 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 FAM49BQ9NUQ9 324 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 CCDC78A2IDD5 438 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 ETS1P14921 441 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 BEX3Q00994 111 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 CCDC33Q8N5R6 958 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 DRC3Q9H069 523 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 DPP3Q9NY33 737 aa12.77□□□□□ -0.37
COLCA1-201ENST00000355430 MAGEA13PA6NCF6 341 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 AIM2O14862 343 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 EFCAB14O75071 495 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 HSPA8P11142 646 aaKnown RBP12.76□□□□□ -0.37
COLCA1-201ENST00000355430 DSG1Q02413 1049 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 EMC1Q8N766 993 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 ACTL9Q8TC94 416 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 PCDH9Q9HC56 1237 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 GRID1Q9ULK0 1009 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 OGTO15294 1046 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 TM9SF1O15321 606 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 IL1RL1Q01638 556 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 GOLGA7BQ2TAP0 167 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 ZNF410Q86VK4 478 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 ZCCHC9Q8N567 271 aaKnown RBP12.76□□□□□ -0.37
COLCA1-201ENST00000355430 SPIRE2Q8WWL2 714 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 ZNF75CPQ92670 426 aaPredicted RBP12.76□□□□□ -0.37
COLCA1-201ENST00000355430 HPDLQ96IR7 371 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 FBXL21Q9UKT6 434 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 MCF2P10911 925 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 FMO1Q01740 532 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 WASHC2DQ5SRD0 308 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 RNF135Q8IUD6 432 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 SCUBE1Q8IWY4 988 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 C10orf88Q9H8K7 445 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 ZCCHC18P0CG32 403 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 ENO3P13929 434 aaPredicted RBP12.76□□□□□ -0.37
COLCA1-201ENST00000355430 CNTN2Q02246 1040 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
COLCA1-201ENST00000355430 EFTUD2Q15029 972 aaKnown RBP eCLIP12.76□□□□□ -0.37
COLCA1-201ENST00000355430 FASTKD1Q53R41 847 aaKnown RBP12.76□□□□□ -0.37
COLCA1-201ENST00000355430 ITPRIPL1Q6GPH6 555 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 CES5AQ6NT32 575 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 LRRC6Q86X45 466 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 MFSD1Q9H3U5 465 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 AVENQ9NQS1 362 aaPredicted RBP12.76□□□□□ -0.37
COLCA1-201ENST00000355430 GPATCH2LQ9NWQ4 482 aa12.76□□□□□ -0.37
COLCA1-201ENST00000355430 PPP1R12AO14974 1030 aaPredicted RBP12.75□□□□□ -0.37
COLCA1-201ENST00000355430 FAM200BP0CF97 657 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 STIP1P31948 543 aaKnown RBP12.75□□□□□ -0.37
COLCA1-201ENST00000355430 AQP5P55064 265 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 MYL6P60660 151 aa12.75□□□□□ -0.37
COLCA1-201ENST00000355430 GCNT1Q02742 428 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms