RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 LRRTM3Q86VH5 581 aa23.87■■□□□ 1.41
SCAMP3-202ENST00000355379 DEFB106AQ8N104 65 aa23.87■■□□□ 1.41
SCAMP3-202ENST00000355379 KRT222Q8N1A0 295 aa23.87■■□□□ 1.41
SCAMP3-202ENST00000355379 FAM71BQ8TC56 605 aa23.87■■□□□ 1.41
SCAMP3-202ENST00000355379 ULBP1Q9BZM6 244 aa23.87■■□□□ 1.41
SCAMP3-202ENST00000355379 DMAP1Q9NPF5 467 aaPredicted RBP23.87■■□□□ 1.41
SCAMP3-202ENST00000355379 TMLHEQ9NVH6 421 aa23.87■■□□□ 1.41
SCAMP3-202ENST00000355379 HPCAL4Q9UM19 191 aa23.87■■□□□ 1.41
SCAMP3-202ENST00000355379 VWA8A3KMH1 1905 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 ZNF487B1APH4 448 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 FAM153BP0C7A2 387 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 CAPN2P17655 700 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 NDUFV1P49821 464 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 CACNA2D1P54289 1103 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 FAM153CQ494X1 144 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 RAB6CQ53S08 254 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 MAP7D3Q8IWC1 876 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 IRGQQ8WZA9 623 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 NT5C3BQ969T7 300 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 TMEM209Q96SK2 561 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 KCNK16Q96T55 309 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 ZCWPW1Q9H0M4 648 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 RAB6CQ9H0N0 254 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 TMEM30AQ9NV96 361 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 FAM153AQ9UHL3 310 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 ADAM28Q9UKQ2 775 aa23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 PRG3Q9Y2Y8 225 aaPredicted RBP23.86■■□□□ 1.41
SCAMP3-202ENST00000355379 BDNFP23560 247 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 KRT17Q04695 432 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 GPS2Q13227 327 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 PPP1R7Q15435 360 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 SCYL2Q6P3W7 929 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 CNKSR3Q6P9H4 555 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 BNIPLQ7Z465 357 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 DCP1BQ8IZD4 617 aaKnown RBP23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 DNAJC5GQ8N7S2 189 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 DIS3LQ8TF46 1054 aaKnown RBP23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 NKD2Q969F2 451 aaPredicted RBP23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 FAM149B1Q96BN6 582 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 TRIM31Q9BZY9 425 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 NEUROG2Q9H2A3 272 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 POPDC2Q9HBU9 364 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 ZDHHC18Q9NUE0 388 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 STAP1Q9ULZ2 295 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 FAN1Q9Y2M0 1017 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 SNX24Q9Y343 169 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 NEU2Q9Y3R4 380 aa23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 COL4A4P53420 1690 aaPredicted RBP23.85■■□□□ 1.41
SCAMP3-202ENST00000355379 CD48P09326 243 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 HSPA8P11142 646 aaKnown RBP23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 HSPA9P38646 679 aaKnown RBP23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 RPL21P46778 160 aaKnown RBP23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 GATMP50440 423 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 CDH6P55285 790 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 DPYSL3Q14195 570 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 ERMARDQ5T6L9 678 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 SPATA2LQ8IUW3 424 aaPredicted RBP23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 GDAP1L1Q96MZ0 367 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 NPY6RQ99463 290 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 SNRNP25Q9BV90 132 aaKnown RBP23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 TMEM39AQ9NV64 488 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 GRHL1Q9NZI5 618 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 ATP11BQ9Y2G3 1177 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 LTBP2Q14767 1821 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 CST8O60676 142 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 TFE3P19532 575 aaPredicted RBP23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 SULT1E1P49888 294 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 BYSLQ13895 437 aaKnown RBP23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 IKBKEQ14164 716 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 TFDP2Q14188 446 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 MRPL58Q14197 206 aaKnown RBP23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 KRT81Q14533 505 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 PM20D1Q6GTS8 502 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 GPRIN1Q7Z2K8 1008 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 RFX6Q8HWS3 928 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 NDRG1Q92597 394 aaKnown RBP23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 CCDC114Q96M63 670 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 C11orf49Q9H6J7 331 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 RRN3Q9NYV6 651 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 WHRNQ9P202 907 aa23.84■■□□□ 1.41
SCAMP3-202ENST00000355379 SPDYE4A6NLX3 237 aa23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 ZBED1O96006 694 aa23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 CLTBP09497 229 aa23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 SLC11A1P49279 550 aa23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 VCPP55072 806 aaKnown RBP23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 ELAVL2Q12926 359 aaKnown RBP23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 ALS2CLQ60I27 953 aa23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 ZDHHC24Q6UX98 284 aa23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 DEFB128Q7Z7B8 93 aa23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 PSTKQ8IV42 348 aaKnown RBP23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 SLC35B2Q8TB61 432 aa23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 LRRC45Q96CN5 670 aa23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 CALN1Q9BXU9 219 aa23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 MAK16Q9BXY0 300 aaKnown RBP23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 PCDH18Q9HCL0 1135 aa23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 MARCH5Q9NX47 278 aa23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 DNPEPQ9ULA0 475 aa23.83■■□□□ 1.41
SCAMP3-202ENST00000355379 TBKBP1A7MCY6 615 aa23.82■■□□□ 1.4
SCAMP3-202ENST00000355379 APOC4-APOC2K7ER74 178 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms