RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 GPR15P49685 360 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 DCAF6Q58WW2 860 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 C9orf50Q5SZB4 431 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 SDHAF4Q5VUM1 108 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 BHLHA9Q7RTU4 235 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 NUP93Q8N1F7 819 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 SEPT5Q99719 369 aaPredicted RBP16.32■□□□□ 0.2
CTSA-202ENST00000354880 NCAPGQ9BPX3 1015 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 C11orf84Q9BUA3 381 aaPredicted RBP16.32■□□□□ 0.2
CTSA-202ENST00000354880 NGRNQ9NPE2 291 aaKnown RBP16.32■□□□□ 0.2
CTSA-202ENST00000354880 USP18Q9UMW8 372 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 LAMA3Q16787 3333 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 CAPN9O14815 690 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 CTIFO43310 598 aaKnown RBP16.31■□□□□ 0.2
CTSA-202ENST00000354880 ZRANB2O95218 330 aaKnown RBP eCLIP16.31■□□□□ 0.24e-10■■■■■ 65.3
CTSA-202ENST00000354880 FGGP02679 453 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 DNAJB2P25686 324 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 IL1R2P27930 398 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 BMPR1AP36894 532 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 MAGEA10P43363 369 aaPredicted RBP16.31■□□□□ 0.2
CTSA-202ENST00000354880 ITIH3Q06033 890 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 IFRD2Q12894 506 aaPredicted RBP16.31■□□□□ 0.2
CTSA-202ENST00000354880 CLUL1Q15846 466 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 SLC25A52Q3SY17 297 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 ZFYVE27Q5T4F4 411 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 TPGS2Q68CL5 300 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 TXNRD3NBQ6F5E7 133 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 AADACL2Q6P093 401 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 SPATA4Q8NEY3 305 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 EXD1Q8NHP7 514 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 ZNF461Q8TAF7 563 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 AUTS2Q8WXX7 1259 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 CENPIQ92674 756 aaPredicted RBP16.31■□□□□ 0.2
CTSA-202ENST00000354880 GOLGA1Q92805 767 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 NAP1L3Q99457 506 aaPredicted RBP16.31■□□□□ 0.2
CTSA-202ENST00000354880 ZBP1Q9H171 429 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 FBXO44Q9H4M3 255 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.31■□□□□ 0.2
CTSA-202ENST00000354880 DDX56Q9NY93 547 aaKnown RBP16.31■□□□□ 0.2
CTSA-202ENST00000354880 AFF4Q9UHB7 1163 aaKnown RBP16.31■□□□□ 0.2
CTSA-202ENST00000354880 PCSK1NQ9UHG2 260 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 STAP1Q9ULZ2 295 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 UQCRHLA0A096LP55 91 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 SOAT2O75908 522 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 ABLIM3O94929 683 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 FYNP06241 537 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 UQCRHP07919 91 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 CTSAP10619 480 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 TFE3P19532 575 aaPredicted RBP16.31■□□□□ 0.2
CTSA-202ENST00000354880 CTNNB1P35222 781 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 ATP13A4Q4VNC1 1196 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 RAB6CQ53S08 254 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 DENND5BQ6ZUT9 1274 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 STRADAQ7RTN6 431 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 NT5C3BQ969T7 300 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 SPATA17Q96L03 361 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 TRIM62Q9BVG3 475 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 RAB6CQ9H0N0 254 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 ZWILCHQ9H900 591 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 FNIP2Q9P278 1114 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 SSX2IPQ9Y2D8 614 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 RWDD3Q9Y3V2 267 aa16.31■□□□□ 0.2
CTSA-202ENST00000354880 CHD9Q3L8U1 2897 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 PLXNA4Q9HCM2 1894 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 LINC01553A4QN01 128 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 PRPSAP2O60256 369 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 TRUB2O95900 331 aaKnown RBP16.3■□□□□ 0.2
CTSA-202ENST00000354880 NCAM1P13591 858 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 ATF2P15336 505 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 HDAC4P56524 1084 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 RPL10AP62906 217 aaKnown RBP16.3■□□□□ 0.2
CTSA-202ENST00000354880 CREMQ03060 361 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 RAB33AQ14088 237 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 SMC1AQ14683 1233 aaKnown RBP16.3■□□□□ 0.2
CTSA-202ENST00000354880 LONRF2Q1L5Z9 754 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 SMTNL2Q2TAL5 461 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 ODF2Q5BJF6 829 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 SYPL2Q5VXT5 272 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 BSPRYQ5W0U4 402 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 TBCBQ99426 244 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 ADAM33Q9BZ11 813 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 HSFX1Q9UBD0 423 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 NAALADL1Q9UQQ1 740 aa16.3■□□□□ 0.2
CTSA-202ENST00000354880 LILRB3O75022 631 aa16.29■□□□□ 0.2
CTSA-202ENST00000354880 RTN3O95197 1032 aaPredicted RBP16.29■□□□□ 0.2
CTSA-202ENST00000354880 KRT1P04264 644 aa16.29■□□□□ 0.2
CTSA-202ENST00000354880 TUFMP49411 452 aaKnown RBP16.29■□□□□ 0.2
CTSA-202ENST00000354880 SULT1E1P49888 294 aa16.29■□□□□ 0.2
CTSA-202ENST00000354880 TUBB4BP68371 445 aa16.29■□□□□ 0.2
CTSA-202ENST00000354880 C2orf54Q08AI8 447 aa16.29■□□□□ 0.2
CTSA-202ENST00000354880 SHHQ15465 462 aa16.29■□□□□ 0.2
CTSA-202ENST00000354880 KCNT1Q5JUK3 1230 aa16.29■□□□□ 0.2
CTSA-202ENST00000354880 SCYL2Q6P3W7 929 aa16.29■□□□□ 0.2
CTSA-202ENST00000354880 RSRC2Q7L4I2 434 aaKnown RBP16.29■□□□□ 0.2
CTSA-202ENST00000354880 BEND5Q7L4P6 421 aa16.29■□□□□ 0.2
CTSA-202ENST00000354880 CCDC50Q8IVM0 306 aa16.29■□□□□ 0.2
CTSA-202ENST00000354880 RCOR2Q8IZ40 523 aa16.29■□□□□ 0.2
CTSA-202ENST00000354880 STKLD1Q8NE28 680 aa16.29■□□□□ 0.2
CTSA-202ENST00000354880 GPR152Q8TDT2 470 aa16.29■□□□□ 0.2
CTSA-202ENST00000354880 UBXN4Q92575 508 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms