RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 GRIN3AQ8TCU5 1115 aa8.16□□□□□ -1.1
CD46-203ENST00000354848 DHX38Q92620 1227 aaKnown RBP8.16□□□□□ -1.1
CD46-203ENST00000354848 SEMA4DQ92854 862 aa8.16□□□□□ -1.1
CD46-203ENST00000354848 GPATCH1Q9BRR8 931 aaKnown RBP8.16□□□□□ -1.1
CD46-203ENST00000354848 APOL6Q9BWW8 343 aa8.16□□□□□ -1.1
CD46-203ENST00000354848 XPNPEP1Q9NQW7 623 aa8.16□□□□□ -1.1
CD46-203ENST00000354848 TRNAU1APQ9NX07 287 aaKnown RBP8.16□□□□□ -1.1
CD46-203ENST00000354848 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.16□□□□□ -1.1
CD46-203ENST00000354848 RIMS3Q9UJD0 308 aa8.16□□□□□ -1.1
CD46-203ENST00000354848 TCRBV9S1A1TA0A576 114 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 ZBTB5O15062 677 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 TBX3O15119 743 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 STAMBPO95630 424 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 PSMC3P17980 439 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 ZNF543Q08ER8 600 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 MOXD1Q6UVY6 613 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 MFSD7Q6UXD7 560 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 ZCCHC23Q6ZST2 131 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 FRMD7Q6ZUT3 714 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 CLEC10AQ8IUN9 316 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 CENPSQ8N2Z9 138 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 NAT8LQ8N9F0 302 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 ADCY4Q8NFM4 1077 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 CRYGNQ8WXF5 182 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 BORCS5Q969J3 196 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 ELMO3Q96BJ8 720 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 TRIM56Q9BRZ2 755 aaKnown RBP8.15□□□□□ -1.1
CD46-203ENST00000354848 NUF2Q9BZD4 464 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 MTMR4Q9NYA4 1195 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 SEL1LQ9UBV2 794 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 EBF1Q9UH73 591 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 VAV3Q9UKW4 847 aa8.15□□□□□ -1.1
CD46-203ENST00000354848 LOC100653049A0A140TA62 436 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 TCRBV7S3A2A0A539 114 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 SOBPA7XYQ1 873 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 TRIM49D1C9J1S8 452 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 FAM86B1E9PN63 330 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 NDUFB5O43674 189 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 FAM155BO75949 473 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 KRT34O76011 436 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 ITGAVP06756 1048 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 LDHBP07195 334 aaKnown RBP8.15□□□□□ -1.11
CD46-203ENST00000354848 FAM86B2P0C5J1 330 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 HMOX2P30519 316 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 L1CAMP32004 1257 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 HSPA13P48723 471 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 EIF2B2P49770 351 aaKnown RBP8.15□□□□□ -1.11
CD46-203ENST00000354848 NDST2P52849 883 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 ZNF829Q3KNS6 432 aaPredicted RBP8.15□□□□□ -1.11
CD46-203ENST00000354848 ZFYVE27Q5T4F4 411 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 DCLRE1AQ6PJP8 1040 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 TMEM126BQ8IUX1 230 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 IGDCC3Q8IVU1 814 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 LILRA2Q8N149 483 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 TAB3Q8N5C8 712 aaPredicted RBP8.15□□□□□ -1.11
CD46-203ENST00000354848 DDHD1Q8NEL9 900 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 HELQQ8TDG4 1101 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 TFB1MQ8WVM0 346 aaKnown RBP8.15□□□□□ -1.11
CD46-203ENST00000354848 CELF1Q92879 486 aaKnown RBP8.15□□□□□ -1.11
CD46-203ENST00000354848 PLEKHA8Q96JA3 519 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 ZNF778Q96MU6 729 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 SLITRK1Q96PX8 696 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 P2RX7Q99572 595 aaKnown RBP8.15□□□□□ -1.11
CD46-203ENST00000354848 DCUN1D5Q9BTE7 237 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 INO80BQ9C086 356 aaPredicted RBP8.15□□□□□ -1.11
CD46-203ENST00000354848 NACA2Q9H009 215 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 NRDE2Q9H7Z3 1164 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 COPS7BQ9H9Q2 264 aaPredicted RBP8.15□□□□□ -1.11
CD46-203ENST00000354848 PACSIN3Q9UKS6 424 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 EXOC7Q9UPT5 735 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 APOBEC2Q9Y235 224 aaKnown RBP8.15□□□□□ -1.11
CD46-203ENST00000354848 RNF11Q9Y3C5 154 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 SQORQ9Y6N5 450 aa8.15□□□□□ -1.11
CD46-203ENST00000354848 TNRC6CQ9HCJ0 1690 aaKnown RBP8.15□□□□□ -1.11
CD46-203ENST00000354848 ZMPSTE24O75844 475 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 TCF4P15884 667 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 CDH3P22223 829 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 ACAT1P24752 427 aaKnown RBP8.14□□□□□ -1.11
CD46-203ENST00000354848 MRPS22P82650 360 aaKnown RBP8.14□□□□□ -1.11
CD46-203ENST00000354848 MYBPC2Q14324 1141 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 OGFOD2Q6N063 350 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 NANOGP8Q6NSW7 305 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 RWDD4Q6NW29 188 aaKnown RBP8.14□□□□□ -1.11
CD46-203ENST00000354848 NEPROQ6NW34 567 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 POTEAQ6S8J7 498 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 TXNRD3Q86VQ6 643 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 WDR75Q8IWA0 830 aaKnown RBP8.14□□□□□ -1.11
CD46-203ENST00000354848 CHERPQ8IWX8 916 aaKnown RBP8.14□□□□□ -1.11
CD46-203ENST00000354848 GSDMBQ8TAX9 411 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 NLRP7Q8WX94 980 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 KCNK16Q96T55 309 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 CBWD1Q9BRT8 395 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 SLC13A1Q9BZW2 595 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 XAB2Q9HCS7 855 aaKnown RBP8.14□□□□□ -1.11
CD46-203ENST00000354848 MSH4O15457 936 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 FAM189A1O60320 539 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 TMEM63AO94886 807 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 ZBTB11O95625 1053 aaPredicted RBP8.14□□□□□ -1.11
CD46-203ENST00000354848 GDF10P55107 478 aa8.14□□□□□ -1.11
CD46-203ENST00000354848 PPP4CP60510 307 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms