RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 SNCAIPQ9Y6H5 919 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 MAP3K19Q56UN5 1328 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 K7ENM7 598 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 IPO5O00410 1097 aaKnown RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 MPOP05164 745 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 GRPP07492 148 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 GNAT2P19087 354 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 SARSP49591 514 aaKnown RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 ASIC1P78348 528 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 TTLL4Q14679 1199 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 E2F5Q15329 346 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 MAN2A1Q16706 1144 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 FAM171A1Q5VUB5 890 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 TRIM48Q8IWZ4 208 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 ADGRG2Q8IZP9 1017 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 SYCE1Q8N0S2 351 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 LINC00528Q8N1L1 170 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 ZNF417Q8TAU3 575 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 TRPC4APQ8TEL6 797 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 NRG4Q8WWG1 115 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 NELFBQ8WX92 580 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 TANKQ92844 425 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 TP53INP1Q96A56 240 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 EPSTI1Q96J88 318 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 NECAB3Q96P71 396 aaPredicted RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 ZNF587Q96SQ5 575 aaPredicted RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 OSBPL9Q96SU4 736 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 SMOQ99835 787 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 EFHD1Q9BUP0 239 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 NAPBQ9H115 298 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 IL25Q9H293 177 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 SLC52A2Q9HAB3 445 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 HPF1Q9NWY4 346 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 MOCS1Q9NZB8 636 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 TCFL5Q9UL49 500 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 PCDHB4Q9Y5E5 795 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 PPLO60437 1756 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 TRAV34A0A0B4J273 112 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 LRRIQ3A6PVS8 624 aaPredicted RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 ZWINTO95229 277 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 TROVE2P10155 538 aaKnown RBP eCLIP6.21□□□□□ -1.42
RFC1-201ENST00000349703 PEX19P40855 299 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 CSE1LP55060 971 aaKnown RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 CASP6P55212 293 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 TRAF1Q13077 416 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 SQSTM1Q13501 440 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 NR1I3Q14994 352 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 RBM20Q5T481 1227 aaKnown RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 STEAP3Q658P3 488 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 KDM7AQ6ZMT4 941 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 DSELQ8IZU8 1212 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 TMEM130Q8N3G9 435 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 ALG3Q92685 438 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 RC3H2Q9HBD1 1191 aaKnown RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 HOMER3Q9NSC5 361 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 TBC1D22BQ9NU19 505 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.21□□□□□ -1.421e-9■■□□□ 11.4
RFC1-201ENST00000349703 HDAC6Q9UBN7 1215 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 RWDD2AQ9UIY3 292 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 FBXW2Q9UKT8 454 aa6.21□□□□□ -1.42
RFC1-201ENST00000349703 AAR2Q9Y312 384 aaKnown RBP6.21□□□□□ -1.42
RFC1-201ENST00000349703 GMNCA6NCL1 334 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 A6NCN8 305 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 LYNP07948 512 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 GRK5P34947 590 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 CDH15P55291 814 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 FPGSQ05932 587 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 ITIH3Q06033 890 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 C2orf54Q08AI8 447 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 CNN3Q15417 329 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 INSCQ1MX18 579 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 DMRTA1Q5VZB9 504 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 SLC6A19Q695T7 634 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 UNC13DQ70J99 1090 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 SPICE1Q8N0Z3 855 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 GJD3Q8N144 294 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 TEX9Q8N6V9 391 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 ERP27Q96DN0 273 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 CGRRF1Q99675 332 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 TRIM4Q9C037 500 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 SERHL2Q9H4I8 314 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 GPN1Q9HCN4 374 aaPredicted RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 SLC40A1Q9NP59 571 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 ZDHHC3Q9NYG2 299 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 RPSAP08865 295 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 SLC2A4P14672 509 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 DYNC1I2Q13409 638 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 TMED1Q13445 227 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 CCDC6Q16204 474 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 FAM174BQ3ZCQ3 159 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 SLC45A4Q5BKX6 768 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 DALRD3Q5D0E6 543 aaKnown RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 PTCRAQ6ISU1 281 aaPredicted RBP6.2□□□□□ -1.42
RFC1-201ENST00000349703 MACC1Q6ZN28 852 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 FAM169BQ8N8A8 192 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 CCDC54Q8NEL0 328 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 OPTNQ96CV9 577 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 ATP6V1G3Q96LB4 118 aa6.2□□□□□ -1.42
RFC1-201ENST00000349703 FAM210AQ96ND0 272 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms